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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	21826309	G-A	HET
SBS	Chr1	34060596	A-C	Homo
SBS	Chr1	39443751	C-G	HET
SBS	Chr10	20531475	C-A	Homo
SBS	Chr12	4480294	G-T	HET
SBS	Chr12	8226034	G-A	HET
SBS	Chr2	1626417	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g03840
SBS	Chr2	696366	A-G	Homo
SBS	Chr3	12563951	C-A	HET
SBS	Chr3	14884119	C-T	HET
SBS	Chr3	21169489	A-T	HET
SBS	Chr3	32356848	T-A	HET
SBS	Chr4	10190340	A-C	HET
SBS	Chr4	17269715	C-T	HET
SBS	Chr4	6946686	C-T	HET
SBS	Chr5	20827486	G-A	HET
SBS	Chr5	23138099	C-T	HET
SBS	Chr5	24622953	C-A	HET
SBS	Chr6	3151931	T-C	HET
SBS	Chr7	1250355	C-T	HET
SBS	Chr7	17337289	T-C	HET
SBS	Chr7	25944920	G-A	HET
SBS	Chr8	8386566	G-A	HET
SBS	Chr8	8386567	T-A	HET

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	1089851	1089852	1
Deletion	Chr6	3152281	3152283	2
Deletion	Chr2	4776490	4776494	4
Deletion	Chr2	5203587	5203590	3
Deletion	Chr9	5538817	5538819	2
Deletion	Chr8	5910928	5910938	10	LOC_Os08g10190
Deletion	Chr5	6349733	6349734	1
Deletion	Chr12	7358566	7358570	4
Deletion	Chr2	7712363	7712373	10
Deletion	Chr12	7974246	7974247	1
Deletion	Chr8	7979382	7979385	3
Deletion	Chr5	11404157	11404163	6
Deletion	Chr2	14431553	14431554	1	LOC_Os02g24890
Deletion	Chr5	18131184	18131185	1
Deletion	Chr4	19624570	19624575	5
Deletion	Chr3	19957952	19957963	11
Deletion	Chr1	19992437	19992451	14	LOC_Os01g36140
Deletion	Chr3	21620001	21634000	13999	3
Deletion	Chr3	21863707	21863722	15
Deletion	Chr8	22526038	22526043	5
Deletion	Chr5	23525165	23525170	5	LOC_Os05g40050
Deletion	Chr7	23783977	23783986	9
Deletion	Chr5	25642365	25642367	2	LOC_Os05g44100
Deletion	Chr8	27614756	27614758	2
Deletion	Chr3	28488996	28488998	2
Deletion	Chr4	28912420	28912430	10
Deletion	Chr1	38945074	38945077	3

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	5943189	5943546	358
Insertion	Chr10	2694374	2694427	54	2
Insertion	Chr10	2694374	2694441	68	2
Insertion	Chr5	25079800	25079805	6

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	23106939	23107258	LOC_Os02g38200

Translocations: 7

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2648137	Chr4	5430066	2
Translocation	Chr12	2648411	Chr4	5430064	2
Translocation	Chr7	4797616	Chr2	10202361
Translocation	Chr9	7424753	Chr8	12246177	LOC_Os08g20390
Translocation	Chr12	19062717	Chr4	5430971	LOC_Os04g10060
Translocation	Chr12	19063159	Chr4	5430064	LOC_Os04g10060
Translocation	Chr4	32065675	Chr3	35082623	LOC_Os04g53810

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