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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	22165958	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g39380
SBS	Chr1	38662988	T-A	HET
SBS	Chr2	27421742	C-A	HET
SBS	Chr2	27421800	A-T	HET
SBS	Chr2	29331848	A-G	HET
SBS	Chr2	29539294	G-A	HET
SBS	Chr3	30366441	T-C	HET
SBS	Chr3	31188056	C-T	HET
SBS	Chr4	10506720	T-G	HET
SBS	Chr4	27522158	T-A	HET
SBS	Chr4	28271025	C-A	HET
SBS	Chr5	12653360	T-G	Homo
SBS	Chr5	12740269	C-T	Homo
SBS	Chr5	20033570	C-T	HET
SBS	Chr6	5497196	T-A	Homo
SBS	Chr6	26135465	T-A	Homo
SBS	Chr6	26708271	C-A	Homo
SBS	Chr8	4842628	A-C	HET
SBS	Chr9	1195705	G-A	HET
SBS	Chr9	2992485	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g06360
SBS	Chr10	7455141	A-T	HET
SBS	Chr11	16868322	A-G	HET

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	351878	351895	17
Deletion	Chr8	430131	430135	4
Deletion	Chr5	1931922	1931933	11
Deletion	Chr9	3681233	3681244	11	LOC_Os09g07400
Deletion	Chr7	4013472	4013474	2
Deletion	Chr11	5330403	5330407	4
Deletion	Chr9	7938835	7938838	3
Deletion	Chr4	10705221	10705223	2
Deletion	Chr9	11230916	11230946	30
Deletion	Chr8	12558939	12558940	1	LOC_Os08g20967
Deletion	Chr6	14215155	14215156	1
Deletion	Chr2	15703265	15703277	12
Deletion	Chr6	18231588	18231595	7
Deletion	Chr10	19094603	19094611	8
Deletion	Chr5	21760484	21760491	7
Deletion	Chr7	26581488	26581492	4
Deletion	Chr7	28028176	28028177	1	LOC_Os07g46880
Deletion	Chr2	31944016	31944026	10
Deletion	Chr1	41928865	41928891	26	LOC_Os01g72320

No Insertion

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	26354025	26695566	LOC_Os06g44250
Inversion	Chr6	26354032	26695571	LOC_Os06g44250

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	14376564	Chr2	32007572

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