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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr11	15144387	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g26450
SBS	Chr11	9509459	G-C	HET
SBS	Chr2	31870714	C-T	Homo
SBS	Chr2	4704681	G-A	HET
SBS	Chr3	20337898	G-C	HET
SBS	Chr4	11767218	G-T	HET
SBS	Chr4	14547660	G-A	Homo
SBS	Chr4	14787421	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g25490
SBS	Chr4	15471100	G-A	HET
SBS	Chr4	16670581	G-A	HET
SBS	Chr4	19380676	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g32330
SBS	Chr4	3325509	C-G	HET
SBS	Chr4	6883817	G-T	HET
SBS	Chr5	3579783	C-T	Homo
SBS	Chr6	12913214	G-A	Homo
SBS	Chr6	17026505	C-T	HET
SBS	Chr7	29426157	A-T	Homo
SBS	Chr7	6606518	T-A	HET
SBS	Chr8	19041135	G-A	HET
SBS	Chr9	19835211	T-A	Homo

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	2009623	2009631	8
Deletion	Chr3	3570592	3570594	2
Deletion	Chr10	7158677	7158747	70
Deletion	Chr5	8957781	8957786	5
Deletion	Chr6	9068726	9068727	1
Deletion	Chr3	10435864	10435866	2
Deletion	Chr11	12118512	12118700	188
Deletion	Chr6	12279028	12279035	7
Deletion	Chr12	14686201	14686202	1
Deletion	Chr7	15151001	15261000	109999	15
Deletion	Chr1	20010086	20010087	1
Deletion	Chr5	23662001	23698000	35999	8
Deletion	Chr8	25258759	25258766	7
Deletion	Chr12	26552057	26552061	4
Deletion	Chr1	27404281	27404301	20

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	41748498	41748498	1
Insertion	Chr10	317850	317850	1	LOC_Os10g01490
Insertion	Chr11	27010692	27010692	1
Insertion	Chr2	1509542	1509554	13
Insertion	Chr7	15761476	15761477	2
Insertion	Chr9	228192	228192	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	12733334	12739104
Inversion	Chr7	15737287	16171578	LOC_Os07g27140

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	4649955	Chr4	18885962	LOC_Os08g08170
Translocation	Chr10	5539893	Chr4	17668421	2
Translocation	Chr10	8466754	Chr3	16766485	LOC_Os03g29420
Translocation	Chr7	9456293	Chr5	4379871	2
Translocation	Chr9	9725072	Chr6	8613918	LOC_Os06g15200
Translocation	Chr7	10180986	Chr4	7199903	2
Translocation	Chr6	20154961	Chr1	25847637
Translocation	Chr11	22193579	Chr4	5327080
Translocation	Chr8	25068579	Chr6	19289433
Translocation	Chr3	32851798	Chr1	12739096	LOC_Os03g57640

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