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Mutant Information

Variant Information

Single base substitutions: 35

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	71758	G-C	HET
SBS	Chr1	8008843	C-T	Homo
SBS	Chr1	8008844	A-T	Homo
SBS	Chr2	3934718	G-A	HET
SBS	Chr2	13021383	G-A	HET
SBS	Chr2	29819655	G-C	HET
SBS	Chr2	30454474	A-T	HET
SBS	Chr3	6221703	A-G	Homo
SBS	Chr3	17615427	G-A	HET
SBS	Chr3	18721629	G-T	HET
SBS	Chr3	19866294	T-A	HET
SBS	Chr3	19866295	C-A	HET
SBS	Chr3	26056697	T-G	Homo
SBS	Chr3	29384783	A-G	Homo
SBS	Chr3	31403357	T-A	Homo
SBS	Chr4	14857746	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g25640
SBS	Chr5	1800082	G-A	Homo	STOP_GAINED	LOC_Os05g04010
SBS	Chr5	2246249	G-A	Homo
SBS	Chr5	15559995	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os05g26820
SBS	Chr5	16214640	C-T	HET
SBS	Chr6	1814137	T-A	HET
SBS	Chr6	27588818	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g45560
SBS	Chr6	27774902	T-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g45880
SBS	Chr7	4140592	A-G	Homo
SBS	Chr7	16429846	G-T	Homo
SBS	Chr7	22416810	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g37420
SBS	Chr8	447054	T-C	HET
SBS	Chr8	22648048	T-C	Homo
SBS	Chr10	12206886	T-C	Homo
SBS	Chr11	14631357	C-G	Homo
SBS	Chr11	15247248	G-T	Homo
SBS	Chr11	19212896	A-G	Homo
SBS	Chr12	8233157	C-A	HET
SBS	Chr12	11580663	C-T	HET
SBS	Chr12	13210178	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os12g23330

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	1387610	1387631	21
Deletion	Chr10	1923856	1923865	9
Deletion	Chr5	2247695	2247707	12	LOC_Os05g04740
Deletion	Chr5	2727949	2727950	1
Deletion	Chr3	7592964	7592970	6	LOC_Os03g14000
Deletion	Chr9	12111308	12111309	1
Deletion	Chr1	13557758	13557765	7
Deletion	Chr4	17436802	17436803	1
Deletion	Chr8	17767554	17767559	5
Deletion	Chr10	18315690	18315692	2
Deletion	Chr12	19535084	19535091	7
Deletion	Chr5	20018789	20018791	2
Deletion	Chr9	20776023	20776025	2
Deletion	Chr3	20955901	20955902	1
Deletion	Chr7	22783474	22783489	15	LOC_Os07g37960
Deletion	Chr5	27719315	27719336	21

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr5	8801263	8801266	4
Insertion	Chr5	15012379	15012496	118
Insertion	Chr9	6535410	6535410	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	1077784	1586687
Inversion	Chr4	1077805	1586708

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	9355078	Chr8	9822301
Translocation	Chr12	27214942	Chr4	19294578	2
Translocation	Chr2	33566007	Chr1	18542519

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