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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	4214677	T-A	HET
SBS	Chr1	4214678	C-T	HET
SBS	Chr1	25377999	T-C	HET
SBS	Chr1	40211801	A-G	HET
SBS	Chr2	3755620	C-T	Homo
SBS	Chr2	19257742	A-G	HET
SBS	Chr3	8832744	C-A	HET
SBS	Chr3	20109425	A-G	Homo
SBS	Chr3	25004798	T-C	Homo
SBS	Chr4	6875818	C-T	Homo
SBS	Chr4	27195816	C-T	HET
SBS	Chr5	3067819	G-A	HET
SBS	Chr5	8825879	C-T	HET
SBS	Chr5	15940373	C-T	Homo
SBS	Chr6	10146362	C-T	HET
SBS	Chr6	13579431	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g23260
SBS	Chr6	21230561	G-A	Homo
SBS	Chr6	23947295	T-C	HET
SBS	Chr7	4882604	T-G	Homo
SBS	Chr7	6446308	A-T	Homo
SBS	Chr7	26760017	G-A	Homo
SBS	Chr8	17822016	A-G	HET
SBS	Chr9	14350170	G-T	HET
SBS	Chr10	3698736	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os10g07040
SBS	Chr10	12413275	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os10g24230
SBS	Chr10	21401910	C-T	HET
SBS	Chr11	17281525	G-A	Homo
SBS	Chr11	23690950	C-A	Homo
SBS	Chr11	25352971	T-A	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	3161641	3161655	14	LOC_Os06g06740
Deletion	Chr6	4825115	4825144	29
Deletion	Chr7	5486422	5486424	2	LOC_Os07g10200
Deletion	Chr6	7321841	7321843	2
Deletion	Chr4	7696942	7696943	1
Deletion	Chr1	10385236	10385249	13	LOC_Os01g18470
Deletion	Chr8	14086576	14086662	86
Deletion	Chr3	19455637	19455890	253
Deletion	Chr3	22865538	22865539	1
Deletion	Chr1	36805859	36805868	9
Deletion	Chr1	38567753	38567764	11
Deletion	Chr1	42826620	42826643	23	LOC_Os01g73910

Insertions: 5

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	30584236	30584239	4
Insertion	Chr10	12414389	12414389	1	LOC_Os10g24230
Insertion	Chr8	6448074	6448074	1
Insertion	Chr10	898384	898384	1
Insertion	Chr11	13614651	13614651	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	27345040	27729818	LOC_Os05g48370
Inversion	Chr5	27383196	27729827	LOC_Os05g48370

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	3817869	Chr7	1714311	LOC_Os07g04040
Translocation	Chr3	7727247	Chr1	40716067	LOC_Os01g70310
Translocation	Chr12	10086949	Chr5	27382819
Translocation	Chr7	13890993	Chr4	15170551
Translocation	Chr11	17323888	Chr5	27378015	2
Translocation	Chr11	17323893	Chr5	27345052	LOC_Os11g29840
Translocation	Chr8	18071293	Chr5	17231133	2
Translocation	Chr8	18071313	Chr1	18734066	2
Translocation	Chr12	18617608	Chr5	27383190
Translocation	Chr5	27378018	Chr3	7646159	LOC_Os05g47780

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