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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	29033050	G-A	HET
SBS	Chr1	41218005	T-C	HET
SBS	Chr1	6317221	G-C	Homo
SBS	Chr10	14628410	C-A	HET
SBS	Chr10	21690542	A-G	HET
SBS	Chr11	19416817	C-T	HET
SBS	Chr12	23152528	C-T	Homo
SBS	Chr2	18067906	G-C	HET
SBS	Chr2	20320062	G-A	HET
SBS	Chr2	24889471	G-C	HET
SBS	Chr2	24952292	G-C	HET
SBS	Chr2	30116542	G-T	HET
SBS	Chr3	30437419	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g53070
SBS	Chr3	487107	C-T	Homo
SBS	Chr3	5118714	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g10110
SBS	Chr4	23167294	A-G	HET
SBS	Chr4	6115937	C-T	HET
SBS	Chr5	15671102	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g26970
SBS	Chr5	20021065	C-T	HET
SBS	Chr5	20491343	C-T	Homo
SBS	Chr6	16708280	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g29270
SBS	Chr6	25231120	C-G	Homo
SBS	Chr6	4494662	G-A	Homo
SBS	Chr6	4494664	C-T	Homo
SBS	Chr6	9633437	C-T	Homo
SBS	Chr7	27848647	G-A	Homo
SBS	Chr8	14168620	A-G	HET
SBS	Chr8	17408408	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g28510
SBS	Chr8	24435832	A-G	HET
SBS	Chr8	557730	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g01910
SBS	Chr9	2242382	G-A	HET

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1574459	1574460	1
Deletion	Chr3	3673577	3673581	4
Deletion	Chr2	4256661	4256668	7
Deletion	Chr1	5296903	5296912	9
Deletion	Chr3	5932344	5932350	6
Deletion	Chr1	6338199	6338211	12
Deletion	Chr10	7587001	7643000	55999	9
Deletion	Chr1	8199064	8199065	1
Deletion	Chr1	8201001	8226000	24999	3
Deletion	Chr6	9186077	9186083	6
Deletion	Chr2	10793633	10793641	8	LOC_Os02g18520
Deletion	Chr2	11081555	11081556	1
Deletion	Chr2	11618443	11618453	10	LOC_Os02g19830
Deletion	Chr6	14715432	14715433	1
Deletion	Chr8	15320674	15320676	2
Deletion	Chr5	15377642	15377652	10
Deletion	Chr11	16052877	16052878	1
Deletion	Chr8	16849262	16849265	3
Deletion	Chr7	19325209	19325220	11
Deletion	Chr9	19353251	19353253	2
Deletion	Chr2	21974223	21974245	22
Deletion	Chr6	24404894	24404895	1	LOC_Os06g40940
Deletion	Chr7	25325743	25325744	1
Deletion	Chr4	25334216	25334220	4
Deletion	Chr11	26315627	26315628	1
Deletion	Chr6	27517662	27517663	1	LOC_Os06g45500
Deletion	Chr2	30014934	30014945	11
Deletion	Chr1	36856342	36856348	6

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	11564239	11564239	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	21801368	22089030	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	10130360	Chr7	18122871
Translocation	Chr4	21801368	Chr1	6132563	2

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