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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7689207	C-T	Homo	STOP_GAINED	LOC_Os01g13740
SBS	Chr1	18423953	G-A	HET
SBS	Chr1	36782993	T-C	HET
SBS	Chr3	34898458	A-G	Homo
SBS	Chr4	6356742	A-C	HET
SBS	Chr4	7140087	G-T	HET
SBS	Chr4	14317018	A-C	HET
SBS	Chr5	5703705	C-T	HET
SBS	Chr5	18834423	T-A	Homo
SBS	Chr6	12672722	C-T	HET
SBS	Chr6	17652576	T-A	HET
SBS	Chr6	28604747	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os06g47170
SBS	Chr7	8437178	G-T	Homo
SBS	Chr7	9391079	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g16120
SBS	Chr8	4724789	T-G	Homo
SBS	Chr8	11089233	G-T	HET
SBS	Chr8	25489438	A-G	HET
SBS	Chr9	7847293	C-T	HET
SBS	Chr9	13805119	C-G	HET
SBS	Chr9	19078537	G-T	Homo
SBS	Chr9	21426316	C-T	HET
SBS	Chr10	16607758	C-A	Homo
SBS	Chr11	11839605	T-C	HET
SBS	Chr12	4266053	G-C	HET

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	7651646	7651650	4
Deletion	Chr5	9310754	9310756	2	LOC_Os05g16410
Deletion	Chr10	10975069	10975070	1
Deletion	Chr2	12224937	12224939	2
Deletion	Chr2	15580841	15580848	7
Deletion	Chr3	19319375	19319384	9

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	12153925	12153925	1
Insertion	Chr6	4802	4802	1
Insertion	Chr7	12585262	12585262	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	22888250	23000940	LOC_Os12g37480
Inversion	Chr12	22888261	23000941	LOC_Os12g37480

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	6823153	Chr4	27350777	LOC_Os06g12590
Translocation	Chr9	9725072	Chr6	8613918	LOC_Os06g15200
Translocation	Chr8	10009125	Chr7	8254035
Translocation	Chr7	11200357	Chr3	25420728	2
Translocation	Chr12	15876581	Chr2	16818007
Translocation	Chr11	16997641	Chr2	474705

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