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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1485474	C-T	HET
SBS	Chr1	30654149	G-A	HET
SBS	Chr1	31436429	T-C	HET
SBS	Chr1	31567978	C-T	HET
SBS	Chr1	3941441	G-A	HET
SBS	Chr10	9339915	C-T	Homo
SBS	Chr11	13702830	C-T	HET
SBS	Chr11	26432756	G-T	HET
SBS	Chr11	3444785	T-C	HET
SBS	Chr2	20913122	A-C	HET
SBS	Chr2	25063206	G-A	HET
SBS	Chr2	32144692	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g52530
SBS	Chr3	18143834	T-A	HET
SBS	Chr4	31373763	G-T	HET
SBS	Chr4	546550	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g01874
SBS	Chr5	14114745	G-A	Homo
SBS	Chr5	17990868	A-G	HET
SBS	Chr7	3529313	A-T	Homo
SBS	Chr8	12114540	T-A	HET
SBS	Chr8	13595530	G-T	HET
SBS	Chr9	22816007	C-T	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	742224	742225	1
Deletion	Chr11	4618807	4618809	2
Deletion	Chr2	7552299	7552303	4
Deletion	Chr10	7613340	7613341	1
Deletion	Chr2	9704363	9704364	1
Deletion	Chr1	9774001	10014000	239999	29
Deletion	Chr6	14736372	14736378	6	LOC_Os06g25180
Deletion	Chr12	16997108	16997117	9
Deletion	Chr2	18489539	18489546	7
Deletion	Chr10	18738606	18738608	2
Deletion	Chr3	22187029	22187044	15
Deletion	Chr10	22700883	22700886	3

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	17722031	17722037	7
Insertion	Chr1	19729900	19729900	1
Insertion	Chr1	34047786	34047788	3
Insertion	Chr11	21536940	21536940	1
Insertion	Chr5	6358318	6358319	2
Insertion	Chr8	12235476	12235476	1
Insertion	Chr8	21890634	21890634	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	25904147	26291648
Inversion	Chr2	25904154	26291661

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	1208015	Chr5	12013251	2
Translocation	Chr11	13511438	Chr3	10048447

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