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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	5239849	C-T	HET
SBS	Chr1	7516526	G-A	HET
SBS	Chr1	29974660	T-A	HET
SBS	Chr1	31229392	G-A	HET
SBS	Chr2	22807021	T-C	Homo
SBS	Chr3	3642537	C-T	Homo
SBS	Chr3	5864565	G-T	Homo
SBS	Chr4	5004163	G-A	Homo
SBS	Chr5	1834308	C-T	HET
SBS	Chr5	6176487	A-T	HET
SBS	Chr5	6176488	A-T	HET
SBS	Chr5	8537187	A-T	Homo
SBS	Chr5	29048741	A-G	HET
SBS	Chr5	29048797	T-A	HET
SBS	Chr6	29807271	T-A	Homo
SBS	Chr7	4164579	T-C	HET
SBS	Chr7	8512362	T-G	HET
SBS	Chr8	4102980	A-G	HET
SBS	Chr8	17244160	C-T	HET
SBS	Chr8	21128698	C-T	HET
SBS	Chr8	23370556	C-T	HET
SBS	Chr9	12444838	G-T	HET
SBS	Chr10	7377682	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g13610
SBS	Chr10	17308526	T-A	HET
SBS	Chr11	14592072	T-A	HET
SBS	Chr11	14686042	C-T	Homo
SBS	Chr11	23287704	A-G	HET
SBS	Chr12	1037642	A-T	HET
SBS	Chr12	6628095	C-T	Homo

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	614294	614296	2
Deletion	Chr1	2834240	2834242	2
Deletion	Chr12	5344461	5344462	1
Deletion	Chr7	6186001	6217000	30999	4
Deletion	Chr2	6380752	6380758	6
Deletion	Chr11	8051077	8051084	7
Deletion	Chr10	8253274	8253275	1
Deletion	Chr8	9378478	9378479	1
Deletion	Chr6	13470810	13470812	2
Deletion	Chr11	14285823	14285838	15
Deletion	Chr8	15920564	15920565	1
Deletion	Chr12	19065420	19065431	11
Deletion	Chr12	20409632	20409634	2
Deletion	Chr12	21039214	21039220	6
Deletion	Chr7	23319160	23319169	9
Deletion	Chr8	25303016	25303028	12
Deletion	Chr5	25945258	25945259	1
Deletion	Chr1	35171976	35171978	2	LOC_Os01g60820

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr9	514361	514364	4
Insertion	Chr11	2084697	2085044	348

No Inversion

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	8086257	Chr5	11371628
Translocation	Chr12	11006014	Chr5	7925377

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