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Mutant Information

Variant Information

Single base substitutions: 23

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	3068246	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os01g06520
SBS	Chr1	33625405	T-C	HET
SBS	Chr10	7750685	C-T	HET
SBS	Chr10	9796674	G-A	HET
SBS	Chr11	9990261	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g17840
SBS	Chr12	24287541	C-T	HET
SBS	Chr2	30730137	A-C	HET
SBS	Chr2	400788	G-A	Homo
SBS	Chr4	11479157	G-A	HET
SBS	Chr4	13033682	C-T	HET
SBS	Chr4	15377109	G-T	HET
SBS	Chr4	20167161	G-A	HET
SBS	Chr4	34288034	A-T	HET
SBS	Chr4	35355681	G-T	Homo
SBS	Chr5	11659817	T-G	HET
SBS	Chr6	6106065	T-G	HET
SBS	Chr6	7319835	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g13310
SBS	Chr7	536391	A-T	Homo
SBS	Chr7	536392	C-A	Homo
SBS	Chr7	538583	G-T	Homo
SBS	Chr8	1961861	C-T	Homo
SBS	Chr9	11615059	G-A	HET
SBS	Chr9	9314351	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os09g15270

Deletions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2405200	2405201	1
Deletion	Chr9	18307494	18307496	2
Deletion	Chr3	21767926	21767927	1
Deletion	Chr3	26764304	26764305	1	LOC_Os03g47310
Deletion	Chr5	27077001	27128000	50999	11
Deletion	Chr7	28366635	28366642	7	LOC_Os07g47440
Deletion	Chr3	33000832	33000838	6	LOC_Os03g57940

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr12	26565876	26565877	2
Insertion	Chr2	15911341	15911342	2
Insertion	Chr4	2359536	2359537	2
Insertion	Chr8	17058226	17058305	80

No Inversion

Translocations: 6

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	323086	Chr9	19136523
Translocation	Chr10	8335189	Chr5	27071088	LOC_Os10g16720
Translocation	Chr11	12007501	Chr4	6643298
Translocation	Chr12	21257844	Chr10	16395158
Translocation	Chr12	22702649	Chr11	20609611	LOC_Os12g37040
Translocation	Chr4	23938474	Chr3	5772805

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