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Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	24365967	C-T	Homo
SBS	Chr1	32564444	G-C	HET
SBS	Chr1	32757666	C-T	HET
SBS	Chr1	35269723	C-T	HET
SBS	Chr1	37099260	A-G	HET
SBS	Chr1	37947535	A-G	HET
SBS	Chr1	42454091	G-A	HET
SBS	Chr10	14005500	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os10g26770
SBS	Chr10	3569015	G-A	HET
SBS	Chr12	12478378	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g22150
SBS	Chr12	23228604	G-A	HET
SBS	Chr2	20961076	A-T	Homo
SBS	Chr3	1925162	T-A	Homo
SBS	Chr3	28265334	G-A	Homo
SBS	Chr3	3147804	G-A	HET
SBS	Chr4	31306973	G-A	Homo
SBS	Chr5	15982193	C-T	HET
SBS	Chr5	5949106	C-T	HET
SBS	Chr6	3731152	A-T	HET
SBS	Chr8	11158096	G-C	HET
SBS	Chr8	1413006	T-A	Homo
SBS	Chr8	1413007	G-T	Homo

Deletions: 6

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	4817289	4817293	4
Deletion	Chr6	11011066	11011067	1	LOC_Os06g19350
Deletion	Chr4	14881217	14881225	8
Deletion	Chr2	26682144	26682146	2
Deletion	Chr2	26912808	26912897	89
Deletion	Chr2	32920942	32920948	6

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr12	10489113	10489113	1
Insertion	Chr5	9992062	9992066	5

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	4645581	4934265	LOC_Os05g08510
Inversion	Chr5	4645589	4934291	LOC_Os05g08510
Inversion	Chr7	11783648	12002347	LOC_Os07g20410

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	5127076	Chr3	13468739	2
Translocation	Chr3	14688079	Chr1	3013134
Translocation	Chr4	17228510	Chr3	26761877	LOC_Os03g47310
Translocation	Chr8	17299160	Chr4	18885956	LOC_Os08g28350
Translocation	Chr9	18185193	Chr1	10304637	LOC_Os09g29910
Translocation	Chr8	18631193	Chr7	16354721	2
Translocation	Chr8	18648503	Chr2	12700669
Translocation	Chr7	25127690	Chr2	21836310
Translocation	Chr11	27415899	Chr9	22016151
Translocation	Chr3	32433143	Chr2	8729142	2

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