Search Results

Mutant Information

Variant Information

Single base substitutions: 22

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	24963494	C-T	HET	INTERGENIC
SBS	Chr1	29776524	G-A	HOMO	INTRON
SBS	Chr3	29419488	C-A	HOMO	INTERGENIC
SBS	Chr3	29998917	T-A	HOMO	INTERGENIC
SBS	Chr4	9357972	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g17064
SBS	Chr4	9608063	A-G	HET	INTERGENIC
SBS	Chr4	12398907	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g21890
SBS	Chr4	25834734	C-T	HET	UTR_3_PRIME
SBS	Chr4	29560169	A-G	HET	INTRON
SBS	Chr5	2643733	G-A	HET	INTRON
SBS	Chr6	24085217	A-T	HET	INTERGENIC
SBS	Chr7	21461588	T-A	HOMO	INTERGENIC
SBS	Chr7	23902626	A-G	HET	INTERGENIC
SBS	Chr7	28002985	T-C	HET	INTRON
SBS	Chr8	3931671	T-A	HET	INTRON
SBS	Chr8	22817889	A-G	HOMO	INTERGENIC
SBS	Chr9	19372443	G-A	HOMO	INTRON
SBS	Chr10	18368672	T-C	HOMO	INTRON
SBS	Chr10	20890920	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os10g39140
SBS	Chr11	8275730	T-A	HET	INTERGENIC
SBS	Chr12	14413480	C-T	HET	INTERGENIC
SBS	Chr12	21208496	C-G	HET	INTRON

Deletions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	2144255	2144263	8
Deletion	Chr4	4997770	4997774	4
Deletion	Chr4	9293163	9293169	6
Deletion	Chr1	12285652	12285653	1
Deletion	Chr4	12775584	12775585	1
Deletion	Chr2	14521579	14521583	4	LOC_Os02g25040
Deletion	Chr2	18954672	18954675	3	LOC_Os02g32070
Deletion	Chr1	19144938	19144973	35
Deletion	Chr4	19505890	19505926	36
Deletion	Chr8	20688081	20688082	1
Deletion	Chr2	21155866	21155875	9
Deletion	Chr11	22411273	22411290	17
Deletion	Chr11	24907620	24907625	5
Deletion	Chr12	25537564	25537565	1	LOC_Os12g41200
Deletion	Chr4	29847249	29847278	29
Deletion	Chr2	30522991	30522992	1

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr3	24536481	24536482	2
Insertion	Chr10	2319462	2319468	7
Insertion	Chr1	4624747	4624751	5
Insertion	Chr1	9584101	9584103	3
Insertion	Chr1	39804019	39804020	2
Insertion	Chr3	16708020	16708021	2
Insertion	Chr4	4266037	4266038	2
Insertion	Chr4	19509057	19509059	3
Insertion	Chr10	1742093	1742096	4

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	12357305	13545118	LOC_Os01g24040

No Translocation

Main menu