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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18717100	T-C	HET
SBS	Chr1	23535269	C-T	Homo
SBS	Chr1	24469649	T-A	HET
SBS	Chr1	24469650	T-A	HET
SBS	Chr1	25171832	C-T	HET
SBS	Chr1	32230884	G-A	HET
SBS	Chr1	33566523	C-T	HET
SBS	Chr10	11852717	C-T	HET
SBS	Chr10	22585256	A-G	HET
SBS	Chr11	23070988	G-A	HET
SBS	Chr11	3971116	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g07790
SBS	Chr12	11093386	A-T	HET
SBS	Chr2	2519361	G-A	HET
SBS	Chr2	32059200	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os02g52380
SBS	Chr2	6113274	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g11820
SBS	Chr3	26541590	A-T	Homo
SBS	Chr4	12838311	G-A	HET
SBS	Chr5	26880849	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g46370
SBS	Chr6	17007404	T-C	HET
SBS	Chr6	9936867	C-T	HET
SBS	Chr7	29149618	C-T	HET
SBS	Chr8	17539208	C-T	HET
SBS	Chr8	2066587	C-A	HET
SBS	Chr8	23565165	G-T	HET	NON_SYNONYMOUS_CODING	LOC_Os08g37280
SBS	Chr8	26259678	T-C	HET
SBS	Chr8	3240771	C-G	HET
SBS	Chr8	7108861	T-C	HET
SBS	Chr9	13257974	C-T	HET

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	454975	454976	1
Deletion	Chr8	3705422	3705423	1
Deletion	Chr5	4214953	4214956	3	LOC_Os05g07820
Deletion	Chr3	5812920	5812923	3
Deletion	Chr4	6688787	6688797	10
Deletion	Chr5	7522385	7522391	6
Deletion	Chr1	8063095	8063099	4
Deletion	Chr2	8886742	8886743	1
Deletion	Chr3	9334103	9334104	1	LOC_Os03g16824
Deletion	Chr12	11135089	11135094	5
Deletion	Chr8	11637201	11637260	59
Deletion	Chr7	12175990	12175991	1
Deletion	Chr1	12674115	12674118	3
Deletion	Chr1	16328489	16328492	3
Deletion	Chr7	17819263	17819266	3
Deletion	Chr4	20479439	20479444	5
Deletion	Chr3	20529186	20529192	6
Deletion	Chr1	25240741	25240754	13
Deletion	Chr3	28736651	28736654	3
Deletion	Chr4	32224029	32224037	8
Deletion	Chr4	35391873	35391874	1

No Insertion

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	508697	547340	LOC_Os03g01830
Inversion	Chr3	509891	547344	LOC_Os03g01840
Inversion	Chr8	21905564	22898606	LOC_Os08g34820
Inversion	Chr8	21905572	22898608	LOC_Os08g34820
Inversion	Chr2	31958163	32315343	LOC_Os02g52850
Inversion	Chr2	31958175	32319794	LOC_Os02g52860

Translocations: 8

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	2564720	Chr3	25764349
Translocation	Chr5	7502543	Chr3	16768906
Translocation	Chr10	9167619	Chr6	8105088	LOC_Os10g18080
Translocation	Chr12	22237329	Chr1	13535664
Translocation	Chr6	23652626	Chr1	26128606
Translocation	Chr12	23986652	Chr7	19565868
Translocation	Chr7	24518511	Chr3	11232143	LOC_Os07g40986
Translocation	Chr4	34390153	Chr3	509879	LOC_Os03g01840

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