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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	16659269	C-A	Homo
SBS	Chr1	33786352	G-A	HET
SBS	Chr1	39401979	A-T	HET
SBS	Chr1	43172145	T-C	HET
SBS	Chr10	13714958	T-C	Homo
SBS	Chr11	10286058	G-A	Homo
SBS	Chr11	9588545	A-T	HET
SBS	Chr12	1289314	A-G	Homo
SBS	Chr12	7802611	T-C	HET
SBS	Chr2	11197185	G-T	HET
SBS	Chr2	33496232	A-T	Homo
SBS	Chr3	1381290	C-T	HET
SBS	Chr3	29474200	T-C	Homo
SBS	Chr3	35148730	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os03g62030
SBS	Chr3	5695304	G-T	HET
SBS	Chr3	5695306	C-T	HET
SBS	Chr4	14751594	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g25454
SBS	Chr4	17403397	C-G	Homo
SBS	Chr4	28881846	G-T	HET
SBS	Chr4	29741379	A-T	HET
SBS	Chr4	5459518	G-A	Homo
SBS	Chr5	28768893	T-A	Homo
SBS	Chr5	28768894	T-C	Homo
SBS	Chr5	4843956	C-A	Homo
SBS	Chr5	4843957	G-A	Homo
SBS	Chr6	12476812	A-T	Homo
SBS	Chr6	13087379	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g22520
SBS	Chr6	1361239	C-A	HET
SBS	Chr6	2208361	G-C	HET
SBS	Chr6	27104610	G-T	Homo
SBS	Chr6	29505563	G-A	HET
SBS	Chr6	8182898	G-A	Homo
SBS	Chr7	27450706	G-C	Homo	NON_SYNONYMOUS_CODING	LOC_Os07g46000
SBS	Chr8	10012193	C-G	HET
SBS	Chr9	15216914	G-T	HET
SBS	Chr9	16702195	A-T	HET
SBS	Chr9	6188532	G-A	HET

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)
Deletion	Chr5	780847	780854	7
Deletion	Chr6	2696985	2696990	5
Deletion	Chr7	6159345	6159346	1
Deletion	Chr4	14647778	14647792	14
Deletion	Chr8	17051091	17051092	1
Deletion	Chr6	21311622	21311629	7
Deletion	Chr8	22756325	22756326	1
Deletion	Chr1	29015678	29015679	1
Deletion	Chr2	32771673	32771683	10
Deletion	Chr3	35343935	35343941	6
Deletion	Chr1	39290130	39290148	18

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	10054784	10054784	1
Insertion	Chr5	5207897	5207898	2
Insertion	Chr9	12679412	12679413	2	LOC_Os09g21020

No Inversion

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	1208017	Chr5	12013389	2
Translocation	Chr12	1221666	Chr1	30237136	LOC_Os12g03200
Translocation	Chr8	17364985	Chr1	23038069
Translocation	Chr8	17368666	Chr1	23038071	LOC_Os08g28460

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