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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	30743735	G-A	HET
SBS	Chr1	39415193	C-T	HET
SBS	Chr2	11808677	G-A	HET
SBS	Chr2	24008839	T-A	HET
SBS	Chr2	30299938	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g49570
SBS	Chr3	33118172	A-T	Homo
SBS	Chr4	6584929	G-C	HET
SBS	Chr4	10226829	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g18500
SBS	Chr4	13231579	C-T	HET
SBS	Chr5	4789002	C-G	HET
SBS	Chr6	21818069	T-C	Homo
SBS	Chr6	30424666	G-A	HET
SBS	Chr7	11936205	C-T	HET
SBS	Chr8	8359394	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g13950
SBS	Chr8	17936548	G-C	HET
SBS	Chr9	2694373	G-A	Homo
SBS	Chr9	4500569	C-T	Homo
SBS	Chr10	17052542	G-A	Homo
SBS	Chr10	21616663	G-T	HET
SBS	Chr10	21616664	C-T	HET
SBS	Chr10	22923461	T-C	HET
SBS	Chr11	6483536	A-G	HET
SBS	Chr12	11500530	A-G	Homo
SBS	Chr12	16988150	A-G	HET

Deletions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	1284444	1284454	10
Deletion	Chr8	2053336	2053337	1
Deletion	Chr2	2196290	2196291	1
Deletion	Chr4	3107637	3107649	12
Deletion	Chr5	8055864	8055865	1	LOC_Os05g14320
Deletion	Chr7	9236605	9236606	1
Deletion	Chr7	11222425	11222426	1
Deletion	Chr11	13071683	13071687	4
Deletion	Chr7	18123696	18123846	150
Deletion	Chr8	21578959	21578960	1	LOC_Os08g34380
Deletion	Chr5	24663048	24663050	2
Deletion	Chr1	26604317	26604332	15	LOC_Os01g46710

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr4	15147584	15147584	1
Insertion	Chr9	14334102	14334102	1
Insertion	Chr10	5985524	5985524	1

No Inversion

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	7648697	Chr11	5772571
Translocation	Chr11	18402825	Chr3	14392179	LOC_Os11g31490
Translocation	Chr11	28256119	Chr2	13043193	LOC_Os11g47030

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