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Mutant Information

Mutant NameFN4151-S [Download]
GenerationM2
Genus SpeciesOryza Sativa
CultivarKitaake
Alignment File (BAM File)Download FN4151-S Alignment File
Seed AvailabilityYes [Order Seeds]
Mapping
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Variant Information

Single base substitutions: 39
Variant Type Chromosome Position Change Genotype Effect Gene Affected
SBSChr113115757C-THET
SBSChr11765923A-CHETNON_SYNONYMOUS_CODINGLOC_Os01g04070
SBSChr128813921C-THET
SBSChr132952566T-AHomo
SBSChr13769537G-THET
SBSChr142104148T-AHomo
SBSChr107974625G-AHET
SBSChr111903696G-THET
SBSChr112097945A-THET
SBSChr112316180G-AHET
SBSChr1127187882C-AHET
SBSChr1210818097C-THET
SBSChr1211355257C-THET
SBSChr225600843C-GHET
SBSChr31067770C-AHET
SBSChr320053998C-THomo
SBSChr325941982G-THET
SBSChr326600540T-AHET
SBSChr331737279G-AHET
SBSChr332364516A-THET
SBSChr332774239C-THET
SBSChr336204771A-GHomoNON_SYNONYMOUS_CODINGLOC_Os03g64070
SBSChr41191125G-THETNON_SYNONYMOUS_CODINGLOC_Os04g02960
SBSChr413744465A-GHET
SBSChr42715390C-GHETNON_SYNONYMOUS_CODINGLOC_Os04g05420
SBSChr48656214G-AHET
SBSChr512270422C-AHomo
SBSChr5129536C-AHET
SBSChr519110723T-CHETNON_SYNONYMOUS_CODINGLOC_Os05g32630
SBSChr519110731G-CHETNON_SYNONYMOUS_CODINGLOC_Os05g32630
SBSChr520576534G-AHET
SBSChr522096465C-AHET
SBSChr61487724A-GHomoNON_SYNONYMOUS_CODINGLOC_Os06g03760
SBSChr817760231G-AHomo
SBSChr822586564C-THomo
SBSChr822612676G-AHomo
SBSChr91627212G-THomo
SBSChr921359709A-THET
SBSChr93643453A-GHomo

Deletions: 16
Variant Type Chromosome Start End Size (bp) Number of Genes
DeletionChr51941741941784
DeletionChr7112851911285201
DeletionChr9162645416264595
DeletionChr2207263920726445
DeletionChr1609238760923881
DeletionChr11737442073744255
DeletionChr3790162679016337LOC_Os03g14560
DeletionChr12116157921161580210
DeletionChr313975469139754745
DeletionChr218912517189125181
DeletionChr520706741207067465
DeletionChr422587528225875335LOC_Os04g37960
DeletionChr7229296612292967110
DeletionChr7261817602618177111LOC_Os07g43750
DeletionChr1227302713273027185
DeletionChr131393361313933676

Insertions: 2
Variant Type Chromosome Start End Size (bp) Number of Genes
InsertionChr1115695868156958692
InsertionChr6104971710497171

Inversions: 6
Variant Type Chromosome Position 1 Position 2 Number of Genes
InversionChr951768095244464LOC_Os09g09600
InversionChr951768125244463LOC_Os09g09600
InversionChr1289725189746482LOC_Os12g15700
InversionChr12974649210397036
InversionChr8984246110701761LOC_Os08g16140
InversionChr8984246410701769LOC_Os08g16140

Translocations: 6
Variant Type Chromosome Position 1 Chromosome Position 2 Number of Genes
TranslocationChr83357287Chr226818632
TranslocationChr83358704Chr226818640
TranslocationChr65338299Chr1250739772
TranslocationChr126160125Chr920504294
TranslocationChr1111720698Chr910245949
TranslocationChr1119803528Chr517883158LOC_Os11g33450