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Mutant Information

Variant Information

Single base substitutions: 37

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20845855	C-T	Homo
SBS	Chr1	24332255	G-A	HET
SBS	Chr1	29824040	G-A	Homo
SBS	Chr1	9954059	G-A	HET
SBS	Chr10	17218773	T-C	HET
SBS	Chr10	18835703	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os10g35240
SBS	Chr10	5668922	T-G	Homo
SBS	Chr10	6249599	A-G	Homo
SBS	Chr10	9418972	C-T	Homo
SBS	Chr11	10609801	T-A	HET
SBS	Chr11	15422684	T-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g26850
SBS	Chr11	15567450	G-T	HET
SBS	Chr11	16423491	G-T	HET
SBS	Chr11	4372827	T-A	HET
SBS	Chr12	15688614	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g26780
SBS	Chr12	26490563	G-A	Homo
SBS	Chr2	20891847	T-C	Homo
SBS	Chr2	32030635	C-T	Homo
SBS	Chr2	6862319	A-G	Homo
SBS	Chr3	21990078	C-T	HET
SBS	Chr3	23435182	T-G	Homo
SBS	Chr4	22813511	A-C	Homo
SBS	Chr4	24607859	G-A	Homo
SBS	Chr4	9721460	A-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os04g17740
SBS	Chr5	10983753	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g18920
SBS	Chr5	25350345	C-T	HET
SBS	Chr5	28030717	G-A	Homo
SBS	Chr5	2904740	A-T	HET
SBS	Chr5	4412302	G-A	HET
SBS	Chr5	6613586	G-C	Homo
SBS	Chr6	16153900	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os06g28390
SBS	Chr6	25851485	C-A	HET
SBS	Chr7	15948398	A-G	HET
SBS	Chr8	2854800	T-G	Homo
SBS	Chr9	10082190	G-A	Homo
SBS	Chr9	14624507	T-G	Homo
SBS	Chr9	20856690	G-A	Homo

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2931001	2999000	67999	16
Deletion	Chr11	10461500	10461504	4
Deletion	Chr6	10827083	10827084	1	LOC_Os06g19040
Deletion	Chr5	11138986	11138990	4	LOC_Os05g19190
Deletion	Chr6	13125203	13125205	2
Deletion	Chr8	15171857	15171948	91
Deletion	Chr10	19926131	19926136	5
Deletion	Chr8	24871003	24871014	11	LOC_Os08g39350
Deletion	Chr1	33968527	33968529	2
Deletion	Chr4	35152201	35152202	1
Deletion	Chr1	37836758	37836759	1

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr7	20431189	20431189	1	LOC_Os07g34150

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	2893649	2933157	2
Inversion	Chr5	2895746	2998953	2
Inversion	Chr3	3459637	3927424
Inversion	Chr11	5028197	5077656	LOC_Os11g09370
Inversion	Chr11	5028243	5076407	2
Inversion	Chr2	26396089	27142928	LOC_Os02g43740
Inversion	Chr2	27142688	27142928

Translocations: 12

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	986534	Chr1	19153682	2
Translocation	Chr12	2186618	Chr5	21744392
Translocation	Chr12	2191177	Chr5	21744394
Translocation	Chr6	6500746	Chr2	27142113
Translocation	Chr6	9639460	Chr4	12944748	LOC_Os06g16710
Translocation	Chr4	10454182	Chr2	27141920	LOC_Os04g18800
Translocation	Chr4	10454549	Chr2	15615168	LOC_Os02g26600
Translocation	Chr6	11048888	Chr2	27142123	LOC_Os06g19400
Translocation	Chr6	11048903	Chr2	27142685	LOC_Os06g19400
Translocation	Chr4	17771619	Chr2	19422122
Translocation	Chr7	21638952	Chr4	20118977	LOC_Os04g33260
Translocation	Chr9	22821460	Chr8	10066089

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