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Mutant Information

Variant Information

Single base substitutions: 20

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	1252545	G-A	HET
SBS	Chr1	5995170	C-T	Homo
SBS	Chr1	28875427	G-A	Homo
SBS	Chr1	36755587	A-T	HET
SBS	Chr3	5871305	G-A	HET
SBS	Chr3	24446964	T-C	Homo
SBS	Chr3	32551111	T-C	HET
SBS	Chr4	4279283	G-A	HET
SBS	Chr5	12753579	A-G	Homo	NON_SYNONYMOUS_CODING	LOC_Os05g22460
SBS	Chr5	24449666	A-G	HET
SBS	Chr6	12155048	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os06g21040
SBS	Chr6	13986404	T-C	Homo
SBS	Chr7	8096111	G-A	HET
SBS	Chr7	16159189	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os07g27690
SBS	Chr8	16159519	G-T	HET
SBS	Chr10	14714085	A-T	HET
SBS	Chr11	4768019	G-T	Homo
SBS	Chr11	9316026	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g16790
SBS	Chr11	9349322	C-T	Homo
SBS	Chr11	17164098	G-A	Homo

Deletions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	871403	871404	1
Deletion	Chr11	5082234	5082253	19	LOC_Os11g09474
Deletion	Chr10	5457144	5457153	9
Deletion	Chr5	5551001	5562000	10999	3
Deletion	Chr5	5571001	5666000	94999	14
Deletion	Chr8	15395839	15395843	4
Deletion	Chr11	29011350	29011355	5
Deletion	Chr3	35590256	35590267	11

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	29411336	29411509	174
Insertion	Chr7	4843878	4843878	1	LOC_Os07g09240

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	5681964	5700046
Inversion	Chr8	25060803	25384836	LOC_Os08g39590
Inversion	Chr8	25060819	25384854	LOC_Os08g39590

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	4657003	Chr1	1044289
Translocation	Chr11	4854490	Chr2	15746343
Translocation	Chr12	6977694	Chr3	2404557	3
Translocation	Chr5	9321280	Chr1	27449060
Translocation	Chr8	21628605	Chr5	209907

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