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Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	23158292	G-A	Homo
SBS	Chr1	34054432	G-T	HET
SBS	Chr1	40468980	T-C	HET
SBS	Chr10	13117657	G-A	HET
SBS	Chr10	4728744	G-T	Homo
SBS	Chr10	9551019	A-G	HET
SBS	Chr11	18160726	C-A	HET
SBS	Chr11	7751564	T-C	HET
SBS	Chr12	9931420	G-A	Homo
SBS	Chr2	31801981	G-A	HET
SBS	Chr2	34444307	T-C	HET
SBS	Chr2	35928378	C-T	HET
SBS	Chr2	7559161	T-A	Homo
SBS	Chr3	12400261	T-A	Homo
SBS	Chr3	19650955	C-G	HET
SBS	Chr3	2328987	A-T	HET
SBS	Chr3	4557780	A-G	HET
SBS	Chr3	8373162	C-T	Homo
SBS	Chr4	30064160	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g50820
SBS	Chr5	19966207	A-T	HET
SBS	Chr5	25264595	T-C	HET
SBS	Chr5	9594769	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os05g16824
SBS	Chr6	20053701	G-A	HET
SBS	Chr6	20053702	G-A	HET
SBS	Chr6	20053703	G-A	HET
SBS	Chr7	23113572	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g38480
SBS	Chr7	2952487	T-G	HET
SBS	Chr7	9466991	A-T	HET
SBS	Chr9	13345211	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os09g22030
SBS	Chr9	14748967	G-A	HET

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	741088	741242	154
Deletion	Chr3	7072546	7072547	1
Deletion	Chr10	7935382	7935383	1
Deletion	Chr9	8971736	8971744	8
Deletion	Chr12	12029895	12029896	1
Deletion	Chr6	13968686	13968688	2
Deletion	Chr5	14097629	14097630	1	LOC_Os05g24380
Deletion	Chr8	14458456	14458457	1
Deletion	Chr1	15306803	15306804	1
Deletion	Chr4	16010908	16010909	1
Deletion	Chr3	17180407	17180411	4	LOC_Os03g30100
Deletion	Chr1	19594229	19594235	6
Deletion	Chr5	19855172	19855192	20
Deletion	Chr12	24153114	24153117	3
Deletion	Chr3	24926047	24926053	6
Deletion	Chr12	25039319	25039322	3
Deletion	Chr5	25254693	25254694	1
Deletion	Chr2	29389977	29389992	15
Deletion	Chr3	32008355	32008356	1
Deletion	Chr4	33882181	33882184	3	LOC_Os04g56820
Deletion	Chr1	40535699	40535702	3
Deletion	Chr1	41550677	41550689	12

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	10627343	10627354	12
Insertion	Chr3	10210956	10210956	1
Insertion	Chr5	29695798	29695798	1
Insertion	Chr6	28763937	28763939	3	LOC_Os06g47510
Insertion	Chr6	29264180	29264183	4
Insertion	Chr7	12166680	12166682	3
Insertion	Chr9	19015727	19015730	4

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	14435313	14539574	2
Inversion	Chr9	14435322	14539581	2

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr5	4928618	Chr4	936646

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