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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	30340374	C-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g52740
SBS	Chr1	31416720	G-T	Homo
SBS	Chr1	7725495	T-A	Homo
SBS	Chr1	8347868	G-A	Homo
SBS	Chr10	20010105	A-G	HET
SBS	Chr10	22792954	T-C	Homo
SBS	Chr10	3201152	C-T	Homo
SBS	Chr11	14642925	T-A	Homo
SBS	Chr11	14642926	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os11g25660
SBS	Chr11	28670362	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os11g47451
SBS	Chr12	17587697	A-G	Homo
SBS	Chr12	19955795	T-C	HET
SBS	Chr12	21851360	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g35860
SBS	Chr12	24242495	C-T	Homo
SBS	Chr2	11536644	G-A	HET
SBS	Chr2	13437085	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g22520
SBS	Chr2	31201004	T-G	HET
SBS	Chr2	32516393	G-A	HET
SBS	Chr3	27118973	G-A	HET
SBS	Chr3	27743469	A-T	HET
SBS	Chr4	18421490	C-A	HET
SBS	Chr4	31205706	C-T	Homo
SBS	Chr4	6359119	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os04g11620
SBS	Chr5	10697715	G-A	HET
SBS	Chr5	5724238	G-A	HET
SBS	Chr6	14358245	C-T	HET
SBS	Chr7	14780537	C-T	HET
SBS	Chr7	16765463	C-T	HET
SBS	Chr7	17762782	G-A	HET
SBS	Chr7	21022884	C-T	HET
SBS	Chr7	2583662	A-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g05540
SBS	Chr7	29307411	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os07g48970
SBS	Chr8	23154382	T-A	Homo

Deletions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr12	519762	519763	1
Deletion	Chr10	6700318	6700322	4
Deletion	Chr5	8893528	8893529	1	LOC_Os05g15750
Deletion	Chr2	10507604	10507605	1	LOC_Os02g18080
Deletion	Chr11	11030891	11030892	1
Deletion	Chr1	12250952	12250954	2
Deletion	Chr2	13572380	13572382	2	LOC_Os02g22790
Deletion	Chr12	17587670	17587673	3
Deletion	Chr1	17815088	17815100	12
Deletion	Chr2	19453711	19453734	23
Deletion	Chr5	22695964	22695970	6
Deletion	Chr4	29944340	29944349	9	LOC_Os04g50184
Deletion	Chr1	31492144	31492145	1
Deletion	Chr4	34297509	34297516	7
Deletion	Chr1	38682547	38682559	12

Insertions: 1

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	33510736	33510741	6

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr7	23435662	23436197	LOC_Os07g39114
Inversion	Chr3	26620816	26943912	LOC_Os03g47600

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	16584622	Chr2	20382715	LOC_Os04g28090
Translocation	Chr5	20991481	Chr1	19086215	2
Translocation	Chr12	22800256	Chr4	1178396	LOC_Os12g37180
Translocation	Chr11	24451275	Chr3	12581340	LOC_Os11g40870

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