Search Results

Mutant Information

Variant Information

Single base substitutions: 30

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	31918477	G-T	HET	INTERGENIC
SBS	Chr3	7569949	T-C	HET	INTERGENIC
SBS	Chr3	14329064	G-A	HET	INTERGENIC
SBS	Chr3	17415379	A-G	HET	INTERGENIC
SBS	Chr3	28142236	G-A	HOMO	INTERGENIC
SBS	Chr3	35758403	T-C	HOMO	INTERGENIC
SBS	Chr4	1927114	C-G	HET	INTERGENIC
SBS	Chr4	7257903	C-T	HET	INTERGENIC
SBS	Chr4	7760266	T-A	HET	INTERGENIC
SBS	Chr4	12065434	A-G	HET	INTERGENIC
SBS	Chr4	17195218	G-C	HET	INTERGENIC
SBS	Chr4	25677486	G-A	HET	INTERGENIC
SBS	Chr4	33988808	T-A	HET	INTRON
SBS	Chr6	2838128	A-G	HET	INTRON
SBS	Chr6	27990602	C-T	HET	STOP_GAINED	LOC_Os06g46180
SBS	Chr7	14861827	C-T	HOMO	INTERGENIC
SBS	Chr7	29357696	A-G	HET	INTERGENIC
SBS	Chr10	5299571	G-A	HET	INTERGENIC
SBS	Chr10	8303629	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g16640
SBS	Chr10	12179258	A-C	HOMO	INTERGENIC
SBS	Chr10	12686166	G-C	HET	INTERGENIC
SBS	Chr10	13205127	G-A	HOMO	NON_SYNONYMOUS_CODING	LOC_Os10g25530
SBS	Chr10	15454953	C-T	HOMO	INTRON
SBS	Chr11	1065879	C-T	HET	INTERGENIC
SBS	Chr11	4585600	C-G	HET	INTERGENIC
SBS	Chr11	20660513	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g35240
SBS	Chr12	2693744	A-G	HOMO	INTERGENIC
SBS	Chr12	14394370	A-G	HOMO	INTERGENIC
SBS	Chr12	15613360	A-G	HOMO	SYNONYMOUS_CODING
SBS	Chr12	20057694	C-T	HET	INTERGENIC

Deletions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1356200	1356206	6
Deletion	Chr1	1952271	1952272	1	LOC_Os01g04380
Deletion	Chr12	2488883	2489862	979
Deletion	Chr2	2948636	2948645	9	LOC_Os02g05930
Deletion	Chr3	4203869	4203878	9	LOC_Os03g08270
Deletion	Chr8	5579192	5579193	1
Deletion	Chr4	5671722	5671723	1
Deletion	Chr9	7753880	7753881	1	LOC_Os09g13410
Deletion	Chr1	8234721	8234723	2	LOC_Os01g14720
Deletion	Chr1	8505698	8505700	2
Deletion	Chr10	8660986	8661000	14
Deletion	Chr10	11800891	11800892	1
Deletion	Chr2	15336414	15336415	1	LOC_Os02g26100
Deletion	Chr9	16198582	16198602	20
Deletion	Chr12	20827807	20827829	22
Deletion	Chr11	25253092	25253093	1
Deletion	Chr4	25658253	25658254	1	LOC_Os04g43390
Deletion	Chr4	25677480	25677481	1
Deletion	Chr2	29393845	29393852	7

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr6	6629425	6629426	2
Insertion	Chr6	27094509	27094510	2
Insertion	Chr4	8098296	8098298	3
Insertion	Chr1	4915293	4915294	2
Insertion	Chr7	13541207	13541207	1
Insertion	Chr11	22561874	22561906	33	LOC_Os11g38030
Insertion	Chr11	27475952	27475960	9

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	1335517	1594735
Inversion	Chr6	13452567	13578043	2
Inversion	Chr6	13453047	13578056	2
Inversion	Chr4	34015026	34114157	2

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2488887	Chr11	705956
Translocation	Chr12	2489846	Chr11	705954

Main menu