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Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	13830483	C-A	Homo
SBS	Chr1	18911546	T-A	Homo
SBS	Chr1	21428496	C-G	HET
SBS	Chr1	2521634	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g05340
SBS	Chr1	2521635	C-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os01g05340
SBS	Chr1	29487036	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os01g51290
SBS	Chr10	17837836	G-A	Homo
SBS	Chr10	9093118	T-G	HET
SBS	Chr10	9390990	A-G	HET
SBS	Chr11	12761900	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g22240
SBS	Chr11	13402199	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os11g23238
SBS	Chr2	10513758	C-G	HET
SBS	Chr2	28850493	T-A	Homo
SBS	Chr2	29501947	A-G	Homo
SBS	Chr2	32993161	T-A	Homo
SBS	Chr2	7244836	A-G	HET
SBS	Chr3	2628018	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g05360
SBS	Chr3	30354147	G-T	Homo
SBS	Chr3	7329775	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os03g13560
SBS	Chr4	15478878	G-A	HET
SBS	Chr4	2322948	C-G	Homo
SBS	Chr4	27471659	G-A	HET
SBS	Chr5	15305393	G-A	HET
SBS	Chr5	21900524	G-A	HET
SBS	Chr5	25034048	G-A	HET
SBS	Chr6	14071278	A-G	HET
SBS	Chr6	14076674	C-A	HET
SBS	Chr6	1746450	G-A	Homo
SBS	Chr6	4826766	G-A	HET
SBS	Chr6	7797539	G-C	HET
SBS	Chr7	26145714	C-T	HET
SBS	Chr8	17124184	G-C	HET
SBS	Chr8	7469694	T-C	HET
SBS	Chr8	8432923	T-C	HET
SBS	Chr9	14637578	C-T	HET
SBS	Chr9	6895230	G-A	HET

Deletions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	916160	916169	9	LOC_Os10g02480
Deletion	Chr9	1084638	1084639	1
Deletion	Chr3	6036709	6036711	2
Deletion	Chr3	7352738	7352740	2
Deletion	Chr11	8062208	8062235	27
Deletion	Chr11	10479878	10479879	1
Deletion	Chr12	11463104	11463107	3	LOC_Os12g19670
Deletion	Chr8	14086576	14086662	86
Deletion	Chr4	16239747	16239752	5
Deletion	Chr10	19915808	19915815	7
Deletion	Chr10	21782853	21782854	1
Deletion	Chr5	25290001	25369000	78999	14
Deletion	Chr7	29201317	29201321	4
Deletion	Chr1	33976649	33976658	9

Insertions: 4

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr12	10157173	10157173	1
Insertion	Chr12	4511765	4511769	5
Insertion	Chr6	25246934	25246935	2
Insertion	Chr6	5968336	5968336	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	5693866	6630221
Inversion	Chr9	6538838	6543135	2
Inversion	Chr9	7227243	7246954	2
Inversion	Chr9	14706039	15099019

Translocations: 10

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	6523853	Chr9	6630220
Translocation	Chr11	6523894	Chr9	6630684
Translocation	Chr9	7227246	Chr5	24582698	LOC_Os09g12610
Translocation	Chr9	7232322	Chr5	24582696	LOC_Os09g12620
Translocation	Chr10	8060458	Chr5	16540436	2
Translocation	Chr5	11410420	Chr4	4973307	LOC_Os04g09350
Translocation	Chr9	11727109	Chr4	17810694	LOC_Os09g19610
Translocation	Chr10	12226487	Chr9	20613099
Translocation	Chr12	15191193	Chr4	18885976
Translocation	Chr8	28411992	Chr7	8173490	LOC_Os07g14320

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