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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	21513921	T-C	HET
SBS	Chr1	21612817	T-A	HET
SBS	Chr1	37173534	A-G	HET
SBS	Chr1	6711072	G-T	HET
SBS	Chr1	6867047	C-T	HET
SBS	Chr10	21593295	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os10g40280
SBS	Chr10	6385985	C-A	HET
SBS	Chr11	4364108	A-T	HET
SBS	Chr11	5388470	G-T	Homo
SBS	Chr12	14596257	C-G	HET
SBS	Chr12	24212828	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g39360
SBS	Chr12	24212829	G-T	Homo	NON_SYNONYMOUS_CODING	LOC_Os12g39360
SBS	Chr2	11256897	T-A	HET	NON_SYNONYMOUS_CODING	LOC_Os02g19270
SBS	Chr4	10867468	G-A	HET
SBS	Chr4	13761268	G-A	HET
SBS	Chr4	191909	A-T	HET
SBS	Chr4	23144813	C-A	Homo
SBS	Chr4	5185195	T-C	HET
SBS	Chr4	5938157	A-C	HET
SBS	Chr4	9681165	C-T	HET
SBS	Chr5	1799783	C-G	HET
SBS	Chr6	29697913	G-C	Homo
SBS	Chr7	25543230	G-A	HET
SBS	Chr8	15320717	C-A	HET
SBS	Chr8	22607403	C-G	HET
SBS	Chr8	27784899	G-T	Homo
SBS	Chr8	27784900	C-T	Homo
SBS	Chr9	13008693	C-T	HET
SBS	Chr9	17151105	C-A	HET

Deletions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr2	3896844	3896846	2
Deletion	Chr1	5432921	5432922	1
Deletion	Chr2	5852578	5852579	1
Deletion	Chr3	8085145	8085153	8
Deletion	Chr2	8870239	8870249	10
Deletion	Chr9	10221237	10221238	1
Deletion	Chr11	11586383	11586384	1
Deletion	Chr6	12630193	12630195	2
Deletion	Chr7	15837631	15837641	10
Deletion	Chr11	20790710	20790712	2
Deletion	Chr1	21446001	21518000	71999	10
Deletion	Chr7	28287695	28287696	1
Deletion	Chr3	28811650	28811658	8

Insertions: 3

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	1798534	1798537	4
Insertion	Chr6	11823316	11823316	1
Insertion	Chr7	17320556	17320556	1	LOC_Os07g29500

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	11800733	11807485	2
Inversion	Chr1	18009647	18926872	LOC_Os01g34330
Inversion	Chr1	18009656	18926892	LOC_Os01g34330
Inversion	Chr1	21423487	21765037	LOC_Os01g38229
Inversion	Chr1	21423585	21766848	LOC_Os01g38229
Inversion	Chr2	27035186	27208956	2

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr4	6752488	Chr2	4468729	2
Translocation	Chr11	13474800	Chr9	3412368	2
Translocation	Chr10	13795124	Chr5	28810796

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