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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr10	4504631	C-A	HET
SBS	Chr11	10370140	C-T	HET
SBS	Chr11	11044331	G-A	Homo
SBS	Chr11	14183016	G-A	Homo
SBS	Chr11	3439669	G-A	HET
SBS	Chr11	3439670	T-A	HET
SBS	Chr12	14461944	G-A	HET
SBS	Chr12	7486127	A-G	HET
SBS	Chr12	7486135	G-T	HET
SBS	Chr2	1618642	C-A	HET
SBS	Chr2	22769775	T-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g37720
SBS	Chr2	22922408	G-A	Homo	NON_SYNONYMOUS_CODING	LOC_Os02g37920
SBS	Chr2	3221703	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os02g06460
SBS	Chr2	3918443	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os02g07570
SBS	Chr3	24098351	A-C	HET	NON_SYNONYMOUS_CODING	LOC_Os03g43210
SBS	Chr3	8571177	C-T	HET
SBS	Chr5	12096519	T-A	HET
SBS	Chr5	5779965	T-C	HET
SBS	Chr5	5879679	C-T	HET
SBS	Chr6	11871875	G-A	Homo
SBS	Chr6	15551129	A-T	Homo
SBS	Chr6	16595957	T-A	Homo
SBS	Chr8	15458578	C-T	Homo
SBS	Chr9	14464654	T-A	Homo

Deletions: 18

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr11	3567581	3567582	1	LOC_Os11g07160
Deletion	Chr10	5104682	5104683	1
Deletion	Chr2	5277896	5277904	8	LOC_Os02g10120
Deletion	Chr11	5582689	5582690	1
Deletion	Chr4	6618014	6618026	12
Deletion	Chr11	8806769	8806775	6
Deletion	Chr11	8827808	8827809	1
Deletion	Chr11	10146676	10146678	2
Deletion	Chr2	11068711	11068713	2
Deletion	Chr8	11605772	11605792	20
Deletion	Chr12	15282493	15282509	16
Deletion	Chr7	19134330	19134331	1
Deletion	Chr8	21061961	21061964	3
Deletion	Chr10	22715383	22715384	1	LOC_Os10g42202
Deletion	Chr4	22841061	22841062	1
Deletion	Chr7	23014920	23014925	5
Deletion	Chr3	33927493	33927500	7
Deletion	Chr2	34363974	34363977	3	LOC_Os02g56170

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	6982674	6982675	2
Insertion	Chr11	18198569	18198569	1	LOC_Os11g31220
Insertion	Chr11	2084697	2084894	198
Insertion	Chr11	21581488	21581488	1
Insertion	Chr2	16725449	16725449	1
Insertion	Chr4	35486289	35486289	1
Insertion	Chr6	23344225	23344226	2
Insertion	Chr7	6964698	6964699	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	11302250	11481340	LOC_Os03g20060
Inversion	Chr3	11482722	12197105	LOC_Os03g21310

Translocations: 13

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	2607913	Chr6	15332761	LOC_Os10g05270
Translocation	Chr3	8452093	Chr2	3821621
Translocation	Chr11	9676202	Chr3	19441550	2
Translocation	Chr4	10240724	Chr2	26403809
Translocation	Chr7	10511348	Chr6	11334670
Translocation	Chr3	16448154	Chr1	25435244
Translocation	Chr2	23450869	Chr1	7917849	LOC_Os02g38795
Translocation	Chr11	25330089	Chr7	5262514
Translocation	Chr4	26202376	Chr2	18481704	LOC_Os04g44230
Translocation	Chr11	27371892	Chr6	22347105	2
Translocation	Chr11	28757166	Chr2	4343973
Translocation	Chr7	29118004	Chr2	23245961	LOC_Os07g48630
Translocation	Chr3	29194440	Chr1	31269094

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