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Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect
SBS	Chr1	21079068	C-A	HOMO	INTRON
SBS	Chr1	25064654	T-G	HET	INTERGENIC
SBS	Chr1	25447484	C-T	HET	INTERGENIC
SBS	Chr1	25447487	G-A	HET	INTERGENIC
SBS	Chr1	25447489	A-G	HET	INTERGENIC
SBS	Chr10	18981430	G-T	HOMO	UTR_5_PRIME
SBS	Chr10	20131172	C-T	HET	INTERGENIC
SBS	Chr10	660970	A-G	HET	INTERGENIC
SBS	Chr11	17336908	G-C	HET	INTERGENIC
SBS	Chr11	7391556	G-T	HET	INTERGENIC
SBS	Chr12	10844427	G-A	HOMO	INTERGENIC
SBS	Chr2	13954459	T-C	HET	SYNONYMOUS_CODING
SBS	Chr2	2791140	C-T	HOMO	INTERGENIC
SBS	Chr3	32148525	G-T	HET	INTRON
SBS	Chr3	33122697	C-T	HOMO	INTERGENIC
SBS	Chr4	11422465	G-A	HET	SYNONYMOUS_CODING
SBS	Chr4	15031383	G-A	HET	SYNONYMOUS_CODING
SBS	Chr4	27819988	A-G	HET	INTRON
SBS	Chr6	29159055	C-T	HOMO	INTERGENIC
SBS	Chr7	10608673	C-T	HET	INTERGENIC
SBS	Chr7	10671036	A-G	HET	INTERGENIC
SBS	Chr7	12760280	T-C	HET	SYNONYMOUS_CODING
SBS	Chr7	22621694	T-A	HET	INTERGENIC
SBS	Chr7	9342439	C-T	HOMO	INTERGENIC
SBS	Chr8	13930074	T-C	HOMO	INTERGENIC
SBS	Chr8	3804896	G-A	HOMO	INTERGENIC

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	288309	288317	8
Deletion	Chr8	3774224	3774230	6	LOC_Os08g06740
Deletion	Chr9	5795358	5795366	8
Deletion	Chr9	6828295	6828296	1	LOC_Os09g12090
Deletion	Chr8	7384957	7384974	17
Deletion	Chr1	8905489	8905494	5
Deletion	Chr3	13064345	13064347	2
Deletion	Chr7	13141762	13141789	27	LOC_Os07g23310
Deletion	Chr5	14366964	14366973	9
Deletion	Chr1	15148876	15148884	8	LOC_Os01g27160
Deletion	Chr5	16209155	16209156	1
Deletion	Chr2	18748269	18748270	1
Deletion	Chr7	19026030	19026032	2
Deletion	Chr12	19214001	19420000	206000	23
Deletion	Chr9	20897286	20897294	8
Deletion	Chr4	21191085	21191086	1
Deletion	Chr6	21788551	21788552	1
Deletion	Chr3	22314001	22445000	131000	20
Deletion	Chr4	22761448	22761449	1	LOC_Os04g38260
Deletion	Chr5	22815202	22815228	26
Deletion	Chr1	25434483	25434513	30
Deletion	Chr4	29876607	29876614	7
Deletion	Chr1	29976502	29976504	2
Deletion	Chr2	31143365	31143366	1
Deletion	Chr4	31158093	31172744	14651	LOC_Os04g52440
Deletion	Chr4	31409347	31409353	6
Deletion	Chr4	32289413	32289414	1	LOC_Os04g54200

Insertions: 7

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr2	16479231	16479242	12
Insertion	Chr3	181913	181914	2
Insertion	Chr3	8163030	8163032	3
Insertion	Chr5	16382162	16382163	2
Insertion	Chr6	23545576	23545578	3
Insertion	Chr8	14740268	14740273	6
Insertion	Chr8	6537112	6537112	1

No Inversion

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr9	1877788	Chr2	13467141
Translocation	Chr11	16229027	Chr1	42158279

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