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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	39297566	A-T	HET
SBS	Chr10	19291033	A-T	HOMO
SBS	Chr10	20062072	G-T	HOMO
SBS	Chr10	2444490	G-C	HET
SBS	Chr10	9985016	G-T	HET
SBS	Chr11	12692959	T-G	HET
SBS	Chr11	13497945	C-T	HET	LOC_Os11g23850
SBS	Chr11	15422684	T-G	HET	LOC_Os11g26850
SBS	Chr11	16056740	A-G	HET
SBS	Chr11	16132819	C-A	HET
SBS	Chr12	11594788	G-A	HET
SBS	Chr12	19498039	G-A	HET
SBS	Chr12	22811618	C-A	HET
SBS	Chr12	3785786	C-A	HET
SBS	Chr12	660372	T-C	HET
SBS	Chr12	660379	G-A	HET
SBS	Chr2	18649901	G-A	HET
SBS	Chr3	17946213	A-G	HOMO
SBS	Chr3	35083078	C-T	HET
SBS	Chr3	5379953	T-A	HET
SBS	Chr4	12883354	C-G	HET
SBS	Chr5	3719112	A-G	HET	LOC_Os05g07070
SBS	Chr5	5895815	G-A	HET
SBS	Chr6	17761409	G-C	HOMO
SBS	Chr7	10515525	C-T	HET
SBS	Chr7	14229897	C-A	HET	LOC_Os07g24990
SBS	Chr7	2904136	G-T	HET
SBS	Chr7	7672835	T-A	HET
SBS	Chr8	20002040	T-G	HET	LOC_Os08g32280
SBS	Chr8	23357189	A-G	HET
SBS	Chr8	27638898	G-A	HOMO

Deletions: 26

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	1244278	1244286	9
Deletion	Chr10	2038894	2038895	2	LOC_Os10g04316
Deletion	Chr9	3285419	3285419	1
Deletion	Chr2	6798675	6798675	1
Deletion	Chr12	8346001	8425000	79000	9
Deletion	Chr10	8668513	8668513	1
Deletion	Chr12	9976190	9976267	78
Deletion	Chr4	11004137	11004137	1
Deletion	Chr8	11196319	11196319	1	LOC_Os08g18750
Deletion	Chr5	11364432	11364474	43
Deletion	Chr1	11818026	11818047	22	LOC_Os01g21190
Deletion	Chr1	12408030	12408032	3
Deletion	Chr6	12521294	12521294	1
Deletion	Chr6	13048638	13048638	1
Deletion	Chr6	13373274	13373363	90
Deletion	Chr7	17992219	17992219	1
Deletion	Chr12	19857840	19857931	92
Deletion	Chr12	20222084	20222085	2
Deletion	Chr10	20421610	20421622	13
Deletion	Chr8	22158231	22158231	1
Deletion	Chr1	22311180	22311187	8
Deletion	Chr1	23809332	23809336	5
Deletion	Chr7	25216888	25216941	54
Deletion	Chr2	25904027	25904036	10
Deletion	Chr11	26202358	26202360	3	LOC_Os11g43400
Deletion	Chr4	30309271	30309274	4

Insertions: 14

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	17356885	17356888	4
Insertion	Chr1	40196813	40196813	1	LOC_Os01g69150
Insertion	Chr12	6017232	6017232	1
Insertion	Chr2	13471713	13471797	85
Insertion	Chr2	17937580	17937682	103
Insertion	Chr2	20079750	20079750	1
Insertion	Chr2	3095990	3095993	4
Insertion	Chr2	35105664	35105665	2
Insertion	Chr3	19579147	19579147	1
Insertion	Chr4	5756203	5756204	2
Insertion	Chr5	24225303	24225303	1
Insertion	Chr6	3714280	3714290	11	LOC_Os06g07670
Insertion	Chr7	10511877	10511901	25
Insertion	Chr9	4630536	4630536	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr5	2892183	3030146
Inversion	Chr7	24100010	24507020

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	28331260	Chr2	34015812	LOC_Os02g55550

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