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Mutant Information

Variant Information

Single base substitutions: 35

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12359186	G-A	HET	INTERGENIC
SBS	Chr1	13349971	C-T	HET	INTERGENIC
SBS	Chr1	33748671	G-A	HET	INTRON
SBS	Chr1	34127679	C-T	HET	INTERGENIC
SBS	Chr1	42562725	A-G	HET	INTERGENIC
SBS	Chr10	11150916	C-A	HET	INTERGENIC
SBS	Chr10	22552254	G-A	HET	INTERGENIC
SBS	Chr10	3206804	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g06250
SBS	Chr11	10281484	C-T	HET	INTRON
SBS	Chr11	10399675	C-T	HET	INTRON
SBS	Chr11	11917951	T-G	HOMO	INTRON
SBS	Chr11	12293419	C-T	HET	INTERGENIC
SBS	Chr11	15677423	T-A	HET	INTRON
SBS	Chr11	16666643	G-T	HET	INTERGENIC
SBS	Chr11	22325913	C-T	HET	INTERGENIC
SBS	Chr12	15373126	T-A	HET	INTERGENIC
SBS	Chr2	18901192	C-A	HET	INTRON
SBS	Chr2	32840304	A-T	HOMO	INTERGENIC
SBS	Chr3	18818890	C-G	HOMO	INTERGENIC
SBS	Chr3	2327392	A-T	HOMO	INTERGENIC
SBS	Chr3	27249797	T-C	HOMO	INTRON
SBS	Chr3	5024961	G-A	HOMO	INTERGENIC
SBS	Chr4	27437110	G-A	HET	INTERGENIC
SBS	Chr4	697838	G-A	HET	INTERGENIC
SBS	Chr5	23941935	C-T	HET	INTRON
SBS	Chr6	19200316	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr6	20396927	A-T	HOMO	INTERGENIC
SBS	Chr6	28840436	G-T	HET	INTERGENIC
SBS	Chr7	12745081	A-G	HET	INTERGENIC
SBS	Chr7	14519260	G-A	HET	INTERGENIC
SBS	Chr7	2458484	T-G	HOMO	UTR_3_PRIME
SBS	Chr7	7296632	C-T	HET	INTERGENIC
SBS	Chr7	7515798	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os07g13130
SBS	Chr7	8871409	A-G	HET	INTERGENIC
SBS	Chr8	11002016	G-A	HOMO	INTERGENIC

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	139807	139809	2
Deletion	Chr4	665927	665931	4
Deletion	Chr10	776425	776434	9
Deletion	Chr11	1052158	1052169	11
Deletion	Chr7	4467472	4467478	6	LOC_Os07g08669
Deletion	Chr10	5412001	5571000	159000	16
Deletion	Chr9	5669826	5669849	23
Deletion	Chr11	5852150	5852156	6	LOC_Os11g10670
Deletion	Chr10	6183773	6183775	2
Deletion	Chr6	8269361	8269370	9
Deletion	Chr11	8795589	8795595	6	LOC_Os11g15520
Deletion	Chr11	9687927	9687928	1
Deletion	Chr10	10404309	10404320	11
Deletion	Chr12	10771479	10771495	16
Deletion	Chr8	11836891	11836892	1
Deletion	Chr9	12237090	12237096	6
Deletion	Chr6	12480483	12480489	6
Deletion	Chr7	13108568	13108577	9
Deletion	Chr3	14525271	14525272	1
Deletion	Chr7	16399552	16399557	5
Deletion	Chr10	19790715	19790716	1
Deletion	Chr3	21097289	21097290	1
Deletion	Chr7	22334892	22334908	16
Deletion	Chr9	22561816	22561825	9
Deletion	Chr7	22951805	22951810	5
Deletion	Chr8	23606308	23606310	2
Deletion	Chr12	24093262	24093285	23
Deletion	Chr3	24148502	24148503	1
Deletion	Chr6	26403531	26403532	1
Deletion	Chr1	26640564	26640566	2
Deletion	Chr1	27037620	27037622	2
Deletion	Chr4	29992398	29992399	1
Deletion	Chr3	33570773	33588228	17455	3
Deletion	Chr3	36047656	36047657	1

Insertions: 6

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	29661307	29661307	1
Insertion	Chr12	9501355	9501356	2
Insertion	Chr2	33662626	33662626	1
Insertion	Chr5	8292357	8292358	2
Insertion	Chr6	15771093	15771094	2
Insertion	Chr7	28354245	28354246	2

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	5348812	5377542
Inversion	Chr10	5348823	5570635

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr8	15011896	Chr6	25504578	LOC_Os08g24800

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