Search Results

Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7624833	G-A	HET	INTERGENIC
SBS	Chr1	8744327	A-G	HOMO	INTERGENIC
SBS	Chr1	9923333	G-T	HET	INTERGENIC
SBS	Chr1	14291571	G-T	HET	UTR_3_PRIME
SBS	Chr1	36742930	G-A	HET	INTERGENIC
SBS	Chr1	42013362	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr2	10905833	G-C	HOMO	INTERGENIC
SBS	Chr2	34745276	G-A	HOMO	INTERGENIC
SBS	Chr2	35662534	A-G	HET	INTRON
SBS	Chr3	27781575	A-T	HET	INTERGENIC
SBS	Chr3	28287959	T-A	HET	INTERGENIC
SBS	Chr3	31092266	G-T	HOMO	INTERGENIC
SBS	Chr4	32468405	A-G	HET	INTERGENIC
SBS	Chr6	14075131	A-G	HOMO	INTERGENIC
SBS	Chr6	21380811	T-A	HOMO	INTERGENIC
SBS	Chr6	28526242	G-A	HOMO	INTERGENIC
SBS	Chr7	4546827	T-C	HET	INTRON
SBS	Chr7	7844806	C-T	HET	INTERGENIC
SBS	Chr7	9156866	G-T	HET	INTERGENIC
SBS	Chr7	21008448	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os07g35070
SBS	Chr7	21998340	G-T	HET	INTRON
SBS	Chr8	13958994	G-T	HET	INTERGENIC
SBS	Chr8	22226335	A-G	HOMO	UTR_5_PRIME
SBS	Chr9	7416248	T-C	HET	INTERGENIC
SBS	Chr10	18863651	C-T	HET	INTRON
SBS	Chr11	8268882	G-A	HET	INTERGENIC
SBS	Chr11	11279044	G-A	HET	SYNONYMOUS_CODING
SBS	Chr11	15224211	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os11g26570
SBS	Chr11	23504649	C-A	HET	INTRON
SBS	Chr11	23504650	T-A	HET	INTRON
SBS	Chr12	15613360	A-G	HOMO	SYNONYMOUS_CODING

Deletions: 33

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	701639	701641	2
Deletion	Chr8	2103867	2103897	30
Deletion	Chr8	2710572	2710573	1
Deletion	Chr6	4984001	4993000	9000	LOC_Os06g09790
Deletion	Chr4	5671722	5671723	1
Deletion	Chr3	6005562	6005567	5
Deletion	Chr9	6584917	6584925	8
Deletion	Chr6	7229506	7229511	5
Deletion	Chr11	7453124	7453131	7
Deletion	Chr9	8005742	8005749	7	LOC_Os09g13690
Deletion	Chr7	8194973	8194974	1	LOC_Os07g14350
Deletion	Chr11	8782001	8819000	37000	7
Deletion	Chr2	9812718	9812719	1
Deletion	Chr5	10645001	10670000	25000	2
Deletion	Chr4	11396870	11396873	3	LOC_Os04g20360
Deletion	Chr2	11908592	11908593	1
Deletion	Chr9	11983470	11983484	14
Deletion	Chr6	12788383	12788401	18
Deletion	Chr8	13096380	13096381	1
Deletion	Chr7	13236513	13236590	77
Deletion	Chr9	14291940	14291941	1
Deletion	Chr5	14619107	14619111	4
Deletion	Chr6	16556248	16556253	5	LOC_Os06g29050
Deletion	Chr7	17475817	17475819	2
Deletion	Chr1	17774692	17774693	1
Deletion	Chr3	18887982	18887991	9
Deletion	Chr6	20804683	20804685	2
Deletion	Chr4	22303231	22303240	9
Deletion	Chr1	24014217	24014222	5
Deletion	Chr11	25575338	25575340	2
Deletion	Chr11	26997635	26997637	2
Deletion	Chr4	30605011	30605028	17
Deletion	Chr3	34196951	34196953	2

Insertions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr4	33808242	33808243	2
Insertion	Chr11	8563818	8563828	11	LOC_Os11g15180
Insertion	Chr12	983508	983509	2
Insertion	Chr1	22551172	22551172	1
Insertion	Chr1	35974754	35974755	2
Insertion	Chr4	25995558	25995558	1
Insertion	Chr6	18410196	18410196	1
Insertion	Chr7	4126211	4126211	1
Insertion	Chr10	16406712	16406713	2
Insertion	Chr11	22777217	22777220	4
Insertion	Chr12	6416744	6416746	3
Insertion	Chr12	6707532	6707532	1
Insertion	Chr12	9666591	9666634	44

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	2848231	2848331
Inversion	Chr11	7260833	8126709
Inversion	Chr1	14600315	15470016	LOC_Os01g25760
Inversion	Chr1	14600790	15470023	LOC_Os01g25760
Inversion	Chr11	14960380	14960566

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	4402712	Chr6	4993471	LOC_Os07g08520
Translocation	Chr7	4402717	Chr6	4983830	LOC_Os07g08520
Translocation	Chr11	21326764	Chr7	15710925

Main menu