Search Results

Mutant Information

Variant Information

Single base substitutions: 26

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	7781833	G-T	HET	INTERGENIC
SBS	Chr1	8987682	T-C	HET	INTERGENIC
SBS	Chr1	30543615	G-A	HOMO	SYNONYMOUS_CODING
SBS	Chr1	31123825	G-A	HET	INTRON
SBS	Chr1	37884611	G-A	HOMO	INTERGENIC
SBS	Chr2	7056039	G-A	HET	INTERGENIC
SBS	Chr3	3139185	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os03g06260
SBS	Chr3	13559330	C-T	HOMO	INTERGENIC
SBS	Chr4	10809249	G-T	HOMO	SYNONYMOUS_CODING
SBS	Chr4	20613861	T-C	HOMO	INTERGENIC
SBS	Chr5	17682951	C-T	HOMO	INTERGENIC
SBS	Chr6	3071004	G-C	HET	INTERGENIC
SBS	Chr7	2919466	A-G	HOMO	INTERGENIC
SBS	Chr7	8657073	G-T	HOMO	INTERGENIC
SBS	Chr8	12606978	G-A	HET	INTERGENIC
SBS	Chr8	13213313	T-C	HET	INTRON
SBS	Chr8	25780365	A-T	HET	INTERGENIC
SBS	Chr9	1371704	C-T	HET	INTERGENIC
SBS	Chr9	8334371	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g14080
SBS	Chr9	22635926	C-T	HET	START_GAINED
SBS	Chr10	6183113	G-A	HET	SYNONYMOUS_CODING
SBS	Chr10	6933670	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os10g12470
SBS	Chr10	18706291	T-C	HET	INTERGENIC
SBS	Chr12	2723850	G-A	HET	INTERGENIC
SBS	Chr12	12155355	G-T	HOMO	INTERGENIC
SBS	Chr12	13390995	A-G	HET	INTERGENIC

Deletions: 31

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	201737	201741	4
Deletion	Chr5	1136928	1136939	11
Deletion	Chr7	2927678	2927682	4
Deletion	Chr8	3027155	3027156	1
Deletion	Chr7	3028304	3028317	13
Deletion	Chr10	3407001	3440000	33000	3
Deletion	Chr8	6165890	6165891	1
Deletion	Chr5	6500442	6500444	2
Deletion	Chr2	7631440	7631441	1	LOC_Os02g13990
Deletion	Chr3	8954995	8955001	6
Deletion	Chr10	9761398	9761399	1
Deletion	Chr11	9950272	9950273	1
Deletion	Chr5	10045032	10045033	1
Deletion	Chr2	10756474	10756558	84
Deletion	Chr11	11532699	11532700	1
Deletion	Chr2	12349809	12349810	1
Deletion	Chr8	12584371	12584372	1
Deletion	Chr8	13309952	13309954	2
Deletion	Chr6	14403498	14403499	1
Deletion	Chr5	14814643	14814644	1
Deletion	Chr12	15321437	15321438	1
Deletion	Chr7	16319702	16319703	1
Deletion	Chr12	16647207	16647278	71	LOC_Os12g28190
Deletion	Chr1	17823462	17823463	1	LOC_Os01g32500
Deletion	Chr2	17919800	17919801	1	LOC_Os02g30160
Deletion	Chr4	21137799	21137823	24
Deletion	Chr4	22228390	22228391	1
Deletion	Chr5	27860938	27860943	5
Deletion	Chr1	29866892	29866894	2
Deletion	Chr6	30144419	30144420	1
Deletion	Chr1	31269897	31269898	1

Insertions: 12

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr5	12263984	12263985	2
Insertion	Chr8	10641546	10641551	6
Insertion	Chr1	15943321	15943321	1
Insertion	Chr3	35121291	35121291	1
Insertion	Chr4	2325065	2325065	1
Insertion	Chr4	13750319	13750319	1
Insertion	Chr6	8656151	8656168	18
Insertion	Chr7	16468844	16468846	3	LOC_Os07g28200
Insertion	Chr9	12542140	12542140	1
Insertion	Chr9	16374750	16374750	1
Insertion	Chr11	22038222	22038259	38
Insertion	Chr12	8199542	8199542	1

No Inversion

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	16899706	Chr4	5291061

Main menu