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Mutant Information

Variant Information

Single base substitutions: 40

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	20979412	G-C	HOMO	INTERGENIC
SBS	Chr1	22665269	C-T	HET	INTERGENIC
SBS	Chr1	24292437	C-T	HOMO	INTERGENIC
SBS	Chr1	25540390	A-T	HET	INTERGENIC
SBS	Chr1	26299245	C-T	HET	INTERGENIC
SBS	Chr1	32175892	G-A	HET	INTERGENIC
SBS	Chr10	15259128	C-T	HET	INTERGENIC
SBS	Chr10	2146153	G-T	HET	INTERGENIC
SBS	Chr10	23141755	T-A	HOMO	INTERGENIC
SBS	Chr10	2400547	G-T	HET	INTERGENIC
SBS	Chr10	5888362	C-T	HET	INTRON
SBS	Chr11	18838613	G-A	HOMO	INTERGENIC
SBS	Chr11	28785949	C-G	HET	UTR_3_PRIME
SBS	Chr12	10261605	A-G	HET	INTERGENIC
SBS	Chr12	3012575	G-A	HOMO	INTERGENIC
SBS	Chr12	9024345	C-T	HET	INTERGENIC
SBS	Chr2	14609724	G-A	HET	INTERGENIC
SBS	Chr2	20984970	T-C	HET	INTERGENIC
SBS	Chr2	20984972	C-A	HET	INTERGENIC
SBS	Chr2	6223655	A-C	HET	INTERGENIC
SBS	Chr2	6623904	G-A	HET	INTERGENIC
SBS	Chr3	1491643	T-A	HET	INTERGENIC
SBS	Chr3	29476943	G-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os03g51520
SBS	Chr3	30157618	C-T	HOMO	INTRON
SBS	Chr3	6844473	A-T	HET	INTERGENIC
SBS	Chr3	7129959	C-T	HOMO	INTRON
SBS	Chr4	16135742	A-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os04g27310
SBS	Chr4	22045500	C-T	HET	INTERGENIC
SBS	Chr4	9212804	G-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g16810
SBS	Chr6	17635857	G-A	HET	INTERGENIC
SBS	Chr6	19961607	G-A	HET	UTR_3_PRIME
SBS	Chr6	21776882	T-G	HET	INTRON
SBS	Chr7	12403177	C-T	HET	INTERGENIC
SBS	Chr7	13393652	A-G	HET	INTERGENIC
SBS	Chr7	21917741	G-C	HOMO	INTERGENIC
SBS	Chr7	26844200	G-A	HET	INTERGENIC
SBS	Chr7	6070006	T-G	HOMO	INTERGENIC
SBS	Chr7	8563563	A-G	HET	SYNONYMOUS_CODING
SBS	Chr9	395704	G-A	HET	INTERGENIC
SBS	Chr9	3997712	C-T	HOMO	NON_SYNONYMOUS_CODING	LOC_Os09g07860

Deletions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	91931	91933	2
Deletion	Chr12	448471	448494	23
Deletion	Chr10	721041	721044	3
Deletion	Chr11	2523732	2523734	2
Deletion	Chr8	6369051	6369052	1
Deletion	Chr7	10592581	10592601	20	LOC_Os07g17900
Deletion	Chr6	11469668	11469670	2	LOC_Os06g20000
Deletion	Chr7	13566858	13566859	1
Deletion	Chr7	13579697	13579698	1
Deletion	Chr7	19581003	19581005	2
Deletion	Chr1	20010086	20010087	1
Deletion	Chr1	20070174	20070178	4	LOC_Os01g36250
Deletion	Chr2	22404805	22404806	1
Deletion	Chr1	25549775	25549776	1
Deletion	Chr5	29630550	29630557	7
Deletion	Chr5	29926506	29926509	3
Deletion	Chr2	33486149	33486157	8
Deletion	Chr4	33656234	33656256	22
Deletion	Chr1	34070691	34070692	1
Deletion	Chr1	34120460	34120461	1

Insertions: 9

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr10	21164784	21164784	1
Insertion	Chr12	12045257	12045257	1
Insertion	Chr2	14697465	14697465	1
Insertion	Chr3	13523269	13523269	1
Insertion	Chr5	11125655	11125655	1
Insertion	Chr5	14520416	14520417	2
Insertion	Chr6	21244996	21244996	1
Insertion	Chr7	7456695	7456695	1
Insertion	Chr8	2972311	2972311	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	12106082	12106259

No Translocation

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