Search Results

Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	12389871	C-A	HET	INTERGENIC
SBS	Chr1	25021890	G-A	HET	INTERGENIC
SBS	Chr1	30955674	C-T	HET	INTRON
SBS	Chr1	31603196	C-G	HET	INTRON
SBS	Chr2	4189260	A-T	HOMO	INTERGENIC
SBS	Chr2	12579797	C-T	HOMO	UTR_3_PRIME
SBS	Chr3	3086943	T-A	HOMO	INTERGENIC
SBS	Chr3	10218266	C-A	HET	SPLICE_SITE_DONOR	LOC_Os03g18220
SBS	Chr3	15042014	C-G	HET	NON_SYNONYMOUS_CODING	LOC_Os03g26310
SBS	Chr4	1466382	C-T	HET	INTERGENIC
SBS	Chr4	6315591	C-T	HET	INTERGENIC
SBS	Chr4	29686526	A-C	HET	INTRON
SBS	Chr6	2617627	C-T	HOMO	INTRON
SBS	Chr6	17805458	A-T	HET	NON_SYNONYMOUS_CODING	LOC_Os06g30700
SBS	Chr6	28994853	G-A	HET	SYNONYMOUS_CODING
SBS	Chr7	3504845	C-T	HOMO	INTERGENIC
SBS	Chr7	25243209	T-A	HOMO	INTRON
SBS	Chr8	1477889	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g03200
SBS	Chr8	4603401	A-T	HET	INTRON
SBS	Chr8	26278275	G-A	HOMO	STOP_GAINED	LOC_Os08g41610
SBS	Chr9	2135786	G-T	HET	INTERGENIC
SBS	Chr9	8765454	C-T	HET	INTERGENIC
SBS	Chr9	10405899	A-G	HET	INTERGENIC
SBS	Chr10	22816458	C-T	HET	INTERGENIC
SBS	Chr11	6455638	G-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g11610
SBS	Chr11	16639675	A-C	HOMO	NON_SYNONYMOUS_CODING	LOC_Os11g28740
SBS	Chr11	24012205	G-A	HET	INTERGENIC
SBS	Chr12	8311288	C-A	HOMO	INTERGENIC

Deletions: 27

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr5	2403974	2403975	1
Deletion	Chr11	3012738	3012756	18	LOC_Os11g06280
Deletion	Chr12	3313323	3313324	1
Deletion	Chr2	6110115	6110116	1
Deletion	Chr4	7566344	7566350	6	LOC_Os04g13550
Deletion	Chr3	8285370	8285371	1	LOC_Os03g15160
Deletion	Chr5	8570117	8570118	1
Deletion	Chr4	9331674	9331690	16
Deletion	Chr7	10074996	10074998	2
Deletion	Chr9	10257653	10257654	1
Deletion	Chr9	10650866	10650867	1	LOC_Os09g17410
Deletion	Chr6	11295604	11295605	1
Deletion	Chr10	11715098	11715100	2
Deletion	Chr5	11766760	11766768	8
Deletion	Chr1	12847718	12847719	1
Deletion	Chr2	13225458	13225461	3
Deletion	Chr4	14985048	14985130	82	LOC_Os04g25820
Deletion	Chr8	17061802	17061803	1	LOC_Os08g28010
Deletion	Chr4	18439001	18451000	12000	2
Deletion	Chr4	19450001	19468000	18000	2
Deletion	Chr4	21187185	21187186	1
Deletion	Chr6	21276651	21276674	23
Deletion	Chr3	21327094	21327095	1
Deletion	Chr4	22672461	22672462	1
Deletion	Chr1	29700234	29700235	1
Deletion	Chr1	30394842	30394843	1
Deletion	Chr3	34207986	34207987	1

Insertions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr11	20618045	20618046	2
Insertion	Chr2	34454055	34454056	2
Insertion	Chr5	5102482	5102510	29
Insertion	Chr6	15843495	15843497	3
Insertion	Chr6	19469204	19469238	35	LOC_Os06g33430
Insertion	Chr7	1378361	1378369	9
Insertion	Chr7	9550995	9550997	3
Insertion	Chr7	13265258	13265267	10
Insertion	Chr8	4650389	4650389	1
Insertion	Chr8	11155228	11155243	16
Insertion	Chr8	14086663	14086684	22
Insertion	Chr8	15287036	15287061	26
Insertion	Chr10	8050296	8050313	18
Insertion	Chr10	23000589	23000589	1
Insertion	Chr11	18245335	18245335	1
Insertion	Chr12	6262995	6263013	19
Insertion	Chr12	17579536	17579536	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	2356403	2495960
Inversion	Chr6	2356416	2495960

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	2071639	Chr8	22766413	LOC_Os12g04830
Translocation	Chr8	15901536	Chr6	15401525
Translocation	Chr7	19449230	Chr1	37074601
Translocation	Chr6	29745368	Chr5	16313566

Main menu