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Mutant Information

Variant Information

Single base substitutions: 17

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	18262925	T-C	HET	INTRON
SBS	Chr10	21626625	A-G	HOMO	INTERGENIC
SBS	Chr10	828010	A-C	HET	INTRON
SBS	Chr12	11762071	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os12g20190
SBS	Chr12	3178272	A-G	HOMO	UTR_3_PRIME
SBS	Chr2	15661055	T-C	HOMO	INTERGENIC
SBS	Chr3	5822594	G-T	HET	INTERGENIC
SBS	Chr4	24095073	C-T	HET	NON_SYNONYMOUS_CODING	LOC_Os04g40570
SBS	Chr5	5102273	C-T	HET	INTERGENIC
SBS	Chr5	5384546	C-T	HET	INTERGENIC
SBS	Chr5	5384549	C-A	HET	INTERGENIC
SBS	Chr6	30312832	T-G	HET	INTERGENIC
SBS	Chr7	4797112	T-A	HOMO	INTERGENIC
SBS	Chr8	22457180	T-A	HET	INTERGENIC
SBS	Chr8	22603123	T-A	HET	INTERGENIC
SBS	Chr8	7519244	C-T	HET	INTERGENIC
SBS	Chr8	826823	G-A	HET	INTERGENIC

Deletions: 35

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	1703112	1703113	1
Deletion	Chr4	3024559	3024560	1
Deletion	Chr6	3169959	3169965	6
Deletion	Chr6	5460855	5460856	1
Deletion	Chr8	6279943	6279948	5	LOC_Os08g10649
Deletion	Chr9	6621900	6621990	90
Deletion	Chr8	8074793	8074795	2	LOC_Os08g13590
Deletion	Chr4	8395976	8396006	30	LOC_Os04g14930
Deletion	Chr12	8522689	8522692	3
Deletion	Chr10	9443973	9443981	8
Deletion	Chr12	10535744	10535745	1	LOC_Os12g18250
Deletion	Chr12	11071956	11071961	5
Deletion	Chr11	11696061	11696062	1
Deletion	Chr3	11834311	11834312	1
Deletion	Chr11	11841638	11841643	5
Deletion	Chr3	12094166	12094167	1
Deletion	Chr6	12642938	12642939	1
Deletion	Chr2	13705399	13705554	155
Deletion	Chr5	14167302	14167316	14
Deletion	Chr12	14730710	14730711	1
Deletion	Chr12	18773242	18773243	1
Deletion	Chr3	20456903	20456906	3
Deletion	Chr1	20882056	20882057	1
Deletion	Chr10	21097470	21097471	1
Deletion	Chr6	21857896	21857897	1
Deletion	Chr4	22875805	22875883	78
Deletion	Chr12	22984375	22984376	1
Deletion	Chr1	23228003	23228004	1	LOC_Os01g41020
Deletion	Chr7	23622864	23622869	5
Deletion	Chr11	27751379	27751380	1
Deletion	Chr1	29326801	29326803	2
Deletion	Chr1	29735984	29735985	1
Deletion	Chr2	31401056	31401058	2
Deletion	Chr1	34661326	34661327	1
Deletion	Chr1	37704058	37704108	50

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	6228843	6228843	1
Insertion	Chr11	14813815	14813817	3
Insertion	Chr2	13841398	13841398	1
Insertion	Chr2	27283855	27283856	2
Insertion	Chr5	11214532	11214532	1
Insertion	Chr5	12748341	12748369	29
Insertion	Chr5	25660375	25660376	2
Insertion	Chr7	11810008	11810058	51

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	1522944	2512414
Inversion	Chr4	11264793	11264973	LOC_Os04g20210

No Translocation

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