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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	37353276	G-A	HET
SBS	Chr1	41106291	G-T	HET
SBS	Chr10	3964400	G-A	HET
SBS	Chr10	7007677	T-C	HET
SBS	Chr10	9297522	C-T	HET	LOC_Os10g18294
SBS	Chr11	10728854	G-T	HET
SBS	Chr11	20007186	T-A	HOMO
SBS	Chr11	20368752	A-T	HOMO
SBS	Chr11	26920943	A-G	HET
SBS	Chr12	20939791	A-T	HET
SBS	Chr2	10328763	C-A	HET
SBS	Chr2	19839964	A-G	HET
SBS	Chr2	20195522	A-T	HET
SBS	Chr2	27492574	T-A	HOMO
SBS	Chr2	27953245	C-T	HET
SBS	Chr2	31861162	G-A	HET
SBS	Chr3	19271471	A-T	HET
SBS	Chr4	30987752	A-T	HOMO
SBS	Chr4	31656471	T-C	HOMO
SBS	Chr5	15957371	A-C	HET
SBS	Chr5	25062075	G-C	HET
SBS	Chr5	988099	G-A	HET	LOC_Os05g02740
SBS	Chr6	15292723	G-A	HET
SBS	Chr6	22537613	T-C	HET
SBS	Chr7	23249986	C-T	HET
SBS	Chr7	4491160	A-G	HOMO
SBS	Chr8	11388055	C-T	HET	LOC_Os08g19080
SBS	Chr8	19600235	T-A	HOMO
SBS	Chr8	19600236	T-A	HOMO
SBS	Chr8	24978781	T-C	HET
SBS	Chr9	13778630	G-C	HOMO
SBS	Chr9	2205706	C-G	HET	LOC_Os09g04190
SBS	Chr9	2971378	G-T	HET	LOC_Os09g06330
SBS	Chr9	7941610	C-T	HET

Deletions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1735463	1735463	1
Deletion	Chr6	3099473	3099485	13
Deletion	Chr10	3386842	3386907	66
Deletion	Chr1	3441735	3441760	26
Deletion	Chr5	6312090	6312100	11
Deletion	Chr8	7025227	7025232	6
Deletion	Chr9	7462259	7462259	1	LOC_Os09g12940
Deletion	Chr11	8372442	8372458	17
Deletion	Chr10	8384707	8384707	1
Deletion	Chr6	8421759	8421760	2
Deletion	Chr6	8734428	8734429	2
Deletion	Chr5	12417671	12417678	8
Deletion	Chr5	15027237	15027238	2
Deletion	Chr2	16596250	16596289	40
Deletion	Chr12	16991596	16991614	19
Deletion	Chr8	18147092	18147092	1
Deletion	Chr1	18457832	18457832	1	LOC_Os01g33530
Deletion	Chr6	19692339	19692342	4	LOC_Os06g33860
Deletion	Chr1	20428579	20428581	3
Deletion	Chr4	22141631	22141631	1
Deletion	Chr5	23043238	23043242	5
Deletion	Chr11	23197704	23197704	1
Deletion	Chr6	27256899	27256914	16
Deletion	Chr2	35890653	35890653	1	LOC_Os02g58740

Insertions: 17

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	12939819	12939819	1
Insertion	Chr11	12949804	12949806	3
Insertion	Chr11	20495066	20495067	2
Insertion	Chr11	23032568	23032568	1
Insertion	Chr12	22275126	22275126	1
Insertion	Chr12	747889	747973	85
Insertion	Chr2	32838486	32838486	1
Insertion	Chr2	35385679	35385680	2
Insertion	Chr2	9198109	9198109	1
Insertion	Chr3	13449106	13449106	1
Insertion	Chr4	20089707	20089791	85
Insertion	Chr5	16366916	16366919	4
Insertion	Chr8	12468710	12468769	60
Insertion	Chr8	15507494	15507494	1
Insertion	Chr8	16462824	16462845	22
Insertion	Chr8	19393929	19393990	62
Insertion	Chr8	24811956	24811959	4

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr12	3916302	3916420
Inversion	Chr1	8165052	8273335
Inversion	Chr7	26092041	26092183
Inversion	Chr3	28177061	28177204

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	17794153	Chr1	4086558
Translocation	Chr12	17795282	Chr1	4086562

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