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Mutant Information

Variant Information

Single base substitutions: 46

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	13089514	C-A	HET
SBS	Chr1	20100106	G-A	HET
SBS	Chr1	25299617	C-T	HET
SBS	Chr1	26012555	T-C	HET
SBS	Chr1	8907667	A-G	HET
SBS	Chr1	9194471	G-T	HET
SBS	Chr10	18440112	T-C	HOMO
SBS	Chr10	21542817	A-T	HET
SBS	Chr10	6534120	G-A	HET
SBS	Chr11	22391631	C-G	HET
SBS	Chr11	5956528	T-C	HOMO
SBS	Chr12	25547763	A-G	HET
SBS	Chr2	2294537	G-A	HET
SBS	Chr2	23826427	C-A	HET
SBS	Chr2	31641867	G-T	HET
SBS	Chr2	8509482	C-T	HOMO
SBS	Chr3	13453251	A-G	HET
SBS	Chr3	14749742	A-G	HET
SBS	Chr3	28019233	G-A	HET
SBS	Chr3	3059436	G-A	HET
SBS	Chr3	4314339	G-A	HOMO
SBS	Chr3	6696684	T-A	HET
SBS	Chr3	7868929	C-A	HET
SBS	Chr4	13091919	G-A	HET	LOC_Os04g23050
SBS	Chr4	22824960	G-A	HOMO
SBS	Chr4	24387646	C-T	HOMO
SBS	Chr4	26284142	G-A	HOMO
SBS	Chr4	26284143	A-T	HOMO
SBS	Chr4	32650309	G-A	HET	LOC_Os04g54890
SBS	Chr4	5521318	A-G	HET
SBS	Chr4	6040957	G-C	HOMO
SBS	Chr5	16247360	G-A	HET
SBS	Chr5	16537525	A-G	HET
SBS	Chr5	27898191	G-A	HOMO
SBS	Chr6	12301126	A-T	HET
SBS	Chr7	1871060	G-T	HET
SBS	Chr7	19882778	T-C	HET
SBS	Chr7	21371223	G-T	HET
SBS	Chr7	4346551	A-C	HET
SBS	Chr7	7773220	T-C	HET	LOC_Os07g13560
SBS	Chr8	11124773	T-A	HET
SBS	Chr8	1313818	G-C	HOMO
SBS	Chr8	21073217	T-A	HET
SBS	Chr8	23706688	T-A	HOMO
SBS	Chr8	23706689	A-T	HOMO
SBS	Chr8	28249458	G-A	HET

Deletions: 29

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	2005296	2005307	12
Deletion	Chr9	2518827	2518827	1
Deletion	Chr11	2534351	2534355	5
Deletion	Chr11	2721109	2721110	2	LOC_Os11g05840
Deletion	Chr7	4837184	4837186	3	LOC_Os07g09230
Deletion	Chr3	5735045	5735047	3
Deletion	Chr9	8710812	8710812	1
Deletion	Chr4	9039650	9039652	3	LOC_Os04g16620
Deletion	Chr11	9615076	9615077	2	LOC_Os11g17260
Deletion	Chr5	9848208	9848212	5
Deletion	Chr4	11663448	11663450	3	LOC_Os04g20790
Deletion	Chr10	12654738	12654758	21
Deletion	Chr5	13503610	13503614	5
Deletion	Chr10	13816702	13816702	1
Deletion	Chr8	14506136	14506223	88
Deletion	Chr9	15142614	15142639	26
Deletion	Chr5	15476969	15477146	178	LOC_Os05g26640
Deletion	Chr7	17618100	17618101	2
Deletion	Chr11	18565243	18565243	1
Deletion	Chr6	19545001	19636000	91000	17
Deletion	Chr6	19641001	19714000	73000	14
Deletion	Chr6	19726001	19807000	81000	9
Deletion	Chr7	22766899	22766908	10
Deletion	Chr1	23385625	23385627	3
Deletion	Chr4	26283610	26283616	7
Deletion	Chr2	28613146	28613147	2
Deletion	Chr7	29173502	29173509	8
Deletion	Chr6	30176295	30176324	30
Deletion	Chr4	30532481	30532671	191	LOC_Os04g51540

Insertions: 24

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	14271826	14271831	6
Insertion	Chr1	15249483	15249483	1
Insertion	Chr1	16648703	16648704	2
Insertion	Chr1	39519260	39519325	66
Insertion	Chr10	1402197	1402197	1
Insertion	Chr10	21922368	21922369	2
Insertion	Chr11	13485792	13485886	95
Insertion	Chr12	16235399	16235399	1
Insertion	Chr12	18025121	18025121	1
Insertion	Chr12	25291482	25291543	62
Insertion	Chr2	139185	139189	5
Insertion	Chr2	27312854	27312950	97
Insertion	Chr2	33528934	33528937	4
Insertion	Chr2	35510317	35510317	1
Insertion	Chr4	10093541	10093541	1
Insertion	Chr4	30465476	30465476	1
Insertion	Chr4	33365360	33365360	1	LOC_Os04g56020
Insertion	Chr5	11897741	11897742	2
Insertion	Chr5	12367599	12367599	1	LOC_Os05g21020
Insertion	Chr6	25557225	25557267	43
Insertion	Chr7	23015667	23015702	36	LOC_Os07g38310
Insertion	Chr8	14167598	14167598	1
Insertion	Chr8	21679698	21679775	78	LOC_Os08g34540
Insertion	Chr8	476086	476086	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr2	5778101	6266735
Inversion	Chr2	5778110	6266745

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr10	4528653	Chr5	5203436
Translocation	Chr4	10606644	Chr3	16913402	2
Translocation	Chr4	14216442	Chr3	17116642

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