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Mutant Information

Variant Information

Single base substitutions: 33

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	7965472	G-A	HOMO
SBS	Chr1	11775901	G-A	HET
SBS	Chr1	24977576	C-T	HOMO
SBS	Chr1	34751674	C-T	HET
SBS	Chr2	9221810	G-A	HET
SBS	Chr2	9773796	C-T	HET
SBS	Chr2	10005698	C-G	HOMO
SBS	Chr2	12253259	C-T	HET
SBS	Chr2	15344454	T-A	HET
SBS	Chr2	24823763	T-C	HET
SBS	Chr3	30977842	C-T	HET
SBS	Chr4	2353470	G-A	HET
SBS	Chr4	2824349	T-A	HET
SBS	Chr4	8626224	G-T	HET	LOC_Os04g15890
SBS	Chr4	8626226	G-A	HET
SBS	Chr4	10524798	G-A	HET
SBS	Chr4	13662130	C-T	HET
SBS	Chr4	22164927	G-C	HOMO	LOC_Os04g36680
SBS	Chr4	23463044	A-T	HET
SBS	Chr6	507372	A-G	HET
SBS	Chr6	8819727	G-A	HET
SBS	Chr6	21639920	C-A	HET
SBS	Chr7	3318330	T-A	HET
SBS	Chr7	14115689	T-C	HOMO
SBS	Chr7	16034907	C-A	HET
SBS	Chr8	7172650	G-A	HET
SBS	Chr8	18819948	A-G	HET
SBS	Chr10	6903366	A-T	HOMO
SBS	Chr10	6903369	G-T	HOMO
SBS	Chr10	16595012	G-A	HOMO
SBS	Chr11	19360093	A-T	HET
SBS	Chr12	185787	T-C	HET
SBS	Chr12	12521277	T-A	HOMO

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	191158	191165	8
Deletion	Chr10	968121	968135	15	LOC_Os10g02560
Deletion	Chr4	1348001	1454000	106000	20
Deletion	Chr1	1350308	1350308	1
Deletion	Chr1	2969998	2969998	1
Deletion	Chr9	3027660	3027665	6
Deletion	Chr8	3381456	3381457	2
Deletion	Chr5	4557377	4557393	17
Deletion	Chr8	4613686	4613687	2
Deletion	Chr11	4874381	4874387	7
Deletion	Chr11	5148669	5148678	10	LOC_Os11g09630
Deletion	Chr9	5487001	5653000	166000	31
Deletion	Chr9	5654001	5697000	43000	8
Deletion	Chr4	6670807	6670807	1
Deletion	Chr10	8253274	8253274	1
Deletion	Chr5	8881940	8881941	2
Deletion	Chr11	9240754	9240757	4
Deletion	Chr1	9431214	9431220	7
Deletion	Chr6	9953415	9953415	1
Deletion	Chr5	12445827	12445827	1	LOC_Os05g21170
Deletion	Chr9	16374776	16374780	5
Deletion	Chr8	19934753	19934753	1
Deletion	Chr8	22140745	22140746	2
Deletion	Chr8	22219753	22219784	32
Deletion	Chr1	22350894	22350896	3
Deletion	Chr10	23085457	23085458	2
Deletion	Chr1	23456925	23456942	18	LOC_Os01g41430
Deletion	Chr1	26980268	26980268	1
Deletion	Chr6	27132004	27132023	20
Deletion	Chr2	28607334	28607335	2
Deletion	Chr2	32654603	32654603	1
Deletion	Chr4	35172140	35172143	4
Deletion	Chr1	36236118	36236124	7
Deletion	Chr1	42073625	42073650	26

Insertions: 15

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	19419056	19419056	1
Insertion	Chr4	1384929	1384929	1	LOC_Os04g03250
Insertion	Chr4	2689485	2689485	1
Insertion	Chr4	14959691	14959692	2
Insertion	Chr4	32464081	32464143	63
Insertion	Chr5	2415907	2415907	1
Insertion	Chr5	21422418	21422510	93
Insertion	Chr6	8800353	8800353	1	LOC_Os06g15510
Insertion	Chr7	17675765	17675765	1	2
Insertion	Chr11	17369813	17369816	4
Insertion	Chr12	16799941	16799941	1
Insertion	Chr12	23744556	23744557	2
Insertion	Chr3	26676711	26676712	2
Insertion	Chr6	6687534	6687534	1
Insertion	Chr12	460750	460753	4

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	16541337	16588857
Inversion	Chr8	16541387	16588861

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr6	12908173	Chr4	14703891
Translocation	Chr6	16640365	Chr5	15703508	LOC_Os06g29170
Translocation	Chr6	16640646	Chr5	15703517

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