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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	18853416	A-C	HET
SBS	Chr1	27114915	C-T	HOMO
SBS	Chr1	35865139	C-T	HET
SBS	Chr10	17391776	C-G	HET
SBS	Chr11	27025847	T-C	HET
SBS	Chr11	4746542	C-G	HET
SBS	Chr12	15319723	A-C	HET
SBS	Chr12	15802950	C-T	HET
SBS	Chr2	17480823	G-A	HET
SBS	Chr2	35054433	T-C	HET
SBS	Chr2	9008288	G-T	HET
SBS	Chr3	10058790	T-G	HOMO
SBS	Chr3	10058796	A-T	HOMO
SBS	Chr3	17562884	C-A	HOMO	LOC_Os03g30810
SBS	Chr3	20306314	T-A	HOMO
SBS	Chr3	21113329	G-A	HET
SBS	Chr3	28572659	C-T	HOMO
SBS	Chr3	9410351	T-A	HET
SBS	Chr4	17537171	G-A	HET	LOC_Os04g29510
SBS	Chr4	5438924	G-A	HOMO
SBS	Chr5	13393285	C-T	HOMO
SBS	Chr5	17712108	A-G	HOMO
SBS	Chr5	17869935	A-G	HET
SBS	Chr5	27474948	C-A	HET	LOC_Os05g47930
SBS	Chr6	24812780	G-T	HOMO
SBS	Chr6	24812781	A-T	HOMO
SBS	Chr6	9777836	C-T	HET
SBS	Chr7	20035765	A-T	HET
SBS	Chr7	2311494	A-T	HET	LOC_Os07g05180
SBS	Chr7	27420798	G-T	HET
SBS	Chr8	15116305	C-T	HET
SBS	Chr8	2681547	T-C	HET

Deletions: 36

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	1444754	1444754	1
Deletion	Chr7	1817920	1817920	1
Deletion	Chr8	2103867	2103896	30
Deletion	Chr8	5276681	5276681	1	LOC_Os08g09110
Deletion	Chr3	5280278	5280281	4	LOC_Os03g10350
Deletion	Chr4	6552180	6552207	28
Deletion	Chr8	6699285	6699312	28	LOC_Os08g11420
Deletion	Chr8	6771211	6771211	1
Deletion	Chr8	6918219	6918219	1
Deletion	Chr4	7123003	7123180	178	LOC_Os04g12890
Deletion	Chr10	8111341	8111341	1
Deletion	Chr4	8419578	8419592	15	LOC_Os04g14980
Deletion	Chr1	10347968	10347969	2
Deletion	Chr12	11616289	11616289	1
Deletion	Chr5	11674169	11674169	1
Deletion	Chr2	11915040	11915040	1
Deletion	Chr5	13352831	13352832	2
Deletion	Chr6	15274611	15274617	7	LOC_Os06g26100
Deletion	Chr5	15314584	15314602	19
Deletion	Chr2	15666314	15666314	1
Deletion	Chr4	15697810	15697810	1
Deletion	Chr2	16521673	16521717	45
Deletion	Chr8	17100017	17100017	1
Deletion	Chr6	17431316	17431319	4
Deletion	Chr8	17546455	17546455	1
Deletion	Chr3	22335613	22335613	1
Deletion	Chr1	22767073	22767074	2
Deletion	Chr3	22920701	22920702	2
Deletion	Chr6	24232315	24232319	5
Deletion	Chr6	27306300	27306300	1
Deletion	Chr11	27346237	27346238	2
Deletion	Chr2	27926928	27926929	2
Deletion	Chr6	28806202	28806211	10
Deletion	Chr2	30360307	30360318	12
Deletion	Chr1	31773962	31773962	1
Deletion	Chr4	35314001	35403000	89000	12

Insertions: 23

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	3794640	3794642	3
Insertion	Chr1	42980772	42980898	127
Insertion	Chr10	15519735	15519788	54
Insertion	Chr11	14224874	14224876	3
Insertion	Chr11	26010110	26010110	1
Insertion	Chr11	26043690	26043751	62
Insertion	Chr12	12037436	12037436	1
Insertion	Chr12	13564545	13564644	100
Insertion	Chr12	887169	887169	1
Insertion	Chr2	10534467	10534522	56
Insertion	Chr3	18698495	18698495	1
Insertion	Chr3	25168125	25168125	1
Insertion	Chr5	26482777	26482904	128
Insertion	Chr6	11372200	11372201	2
Insertion	Chr6	18938673	18938673	1
Insertion	Chr6	9006320	9006320	1
Insertion	Chr7	19102247	19102247	1
Insertion	Chr7	9903210	9903210	1
Insertion	Chr9	16059502	16059504	3
Insertion	Chr9	4148690	4148690	1
Insertion	Chr9	7826574	7826574	1
Insertion	Chr9	8297681	8297793	113
Insertion	Chr9	8523334	8523338	5

Inversions: 8

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr11	2059890	2431878	LOC_Os11g04840
Inversion	Chr11	2059919	2431893	LOC_Os11g04840
Inversion	Chr12	2991037	3146204
Inversion	Chr12	2991041	3146220
Inversion	Chr9	8205220	8205427
Inversion	Chr4	11480251	11480537	LOC_Os04g20560
Inversion	Chr10	14068214	14247244
Inversion	Chr10	14068222	14247246

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr2	15276928	Chr1	22065197
Translocation	Chr2	15388498	Chr1	22065707

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