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Mutant Information

Variant Information

Single base substitutions: 32

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	22114108	A-G	HOMO
SBS	Chr1	28692481	G-A	HOMO	LOC_Os01g49940
SBS	Chr1	41827538	G-A	HOMO
SBS	Chr10	15115441	G-A	HET
SBS	Chr10	16793188	T-C	HET
SBS	Chr11	14318408	C-G	HOMO
SBS	Chr11	26827146	A-G	HET
SBS	Chr11	3297545	C-A	HET
SBS	Chr11	5832180	C-T	HOMO
SBS	Chr12	12279604	C-A	HET
SBS	Chr12	16894565	C-A	HOMO
SBS	Chr12	5015044	C-T	HET
SBS	Chr12	9107533	G-C	HET
SBS	Chr2	24930710	A-G	HET
SBS	Chr2	28981270	A-C	HET
SBS	Chr2	29910372	A-T	HET
SBS	Chr2	8122980	T-A	HET
SBS	Chr3	1981208	T-C	HET
SBS	Chr3	6437428	C-A	HET
SBS	Chr3	6568669	G-A	HET
SBS	Chr3	945587	A-G	HET
SBS	Chr4	10173730	G-C	HET
SBS	Chr4	23076089	C-T	HET
SBS	Chr4	4904537	T-A	HET
SBS	Chr4	5213261	C-T	HET	LOC_Os04g09720
SBS	Chr5	12144390	A-G	HET
SBS	Chr6	17186426	G-A	HET
SBS	Chr7	6537287	A-T	HET
SBS	Chr8	13639600	C-T	HET
SBS	Chr8	23215351	G-A	HOMO
SBS	Chr8	24355786	G-A	HET
SBS	Chr8	2855685	G-A	HOMO

Deletions: 32

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	697330	697337	8
Deletion	Chr11	3678948	3678959	12
Deletion	Chr5	3880701	3880712	12	LOC_Os05g07300
Deletion	Chr6	4737173	4737178	6
Deletion	Chr11	4952061	4952061	1	LOC_Os11g09240
Deletion	Chr1	5338912	5338912	1
Deletion	Chr10	6446579	6446581	3
Deletion	Chr9	7767683	7767683	1
Deletion	Chr1	9295718	9295718	1
Deletion	Chr1	10037162	10037165	4	LOC_Os01g17460
Deletion	Chr6	10246262	10246262	1
Deletion	Chr1	10309746	10309755	10
Deletion	Chr3	10503692	10503693	2
Deletion	Chr8	11225225	11225225	1	LOC_Os08g18820
Deletion	Chr8	14911288	14911288	1
Deletion	Chr8	14937582	14937594	13
Deletion	Chr10	15197053	15197054	2
Deletion	Chr11	15232257	15232257	1
Deletion	Chr9	15373314	15373314	1
Deletion	Chr11	16556391	16556391	1
Deletion	Chr8	17059442	17059442	1
Deletion	Chr5	17139862	17139884	23
Deletion	Chr7	18123415	18123475	61
Deletion	Chr5	21463352	21463352	1
Deletion	Chr11	22109717	22109733	17	LOC_Os11g37440
Deletion	Chr12	23527325	23527326	2
Deletion	Chr7	24822303	24822303	1	LOC_Os07g41430
Deletion	Chr6	25241539	25241539	1
Deletion	Chr8	26494982	26494983	2
Deletion	Chr5	29396274	29396282	9	LOC_Os05g51250
Deletion	Chr1	30471740	30471741	2
Deletion	Chr1	37089952	37089976	25

Insertions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	2002328	2002331	4
Insertion	Chr11	24516968	24516970	3
Insertion	Chr12	26967991	26967992	2
Insertion	Chr12	9917787	9917859	73
Insertion	Chr2	1504810	1504810	1
Insertion	Chr2	24257652	24257696	45
Insertion	Chr2	25801330	25801330	1
Insertion	Chr3	17298092	17298092	1
Insertion	Chr3	25262548	25262636	89
Insertion	Chr3	543233	543233	1
Insertion	Chr3	7297967	7297968	2
Insertion	Chr3	8390821	8390866	46
Insertion	Chr4	1183339	1183344	6
Insertion	Chr4	27492926	27492926	1
Insertion	Chr5	11831050	11831050	1
Insertion	Chr5	14121293	14121293	1
Insertion	Chr6	22465517	22465517	1
Insertion	Chr7	14023100	14023100	1
Insertion	Chr8	15173011	15173011	1
Insertion	Chr8	25592893	25592896	4	LOC_Os08g40440
Insertion	Chr8	3980916	3980917	2
Insertion	Chr9	7803180	7803218	39

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr9	840828	840966
Inversion	Chr8	1703005	1703140
Inversion	Chr4	2307407	2307719
Inversion	Chr10	9296193	9316079	2
Inversion	Chr12	20934474	20934628

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr5	17483801	Chr1	30296718
Translocation	Chr5	17490733	Chr1	30296431	LOC_Os01g52690

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