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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	25369840	C-T	HOMO
SBS	Chr1	27612127	T-C	HET
SBS	Chr1	34388528	G-A	HET	LOC_Os01g59450
SBS	Chr10	16180796	C-T	HET
SBS	Chr11	12003700	C-A	HET
SBS	Chr11	3285862	T-C	HET
SBS	Chr12	23779575	G-A	HET
SBS	Chr12	26882960	G-A	HET
SBS	Chr2	15673871	C-T	HET
SBS	Chr2	24233255	T-C	HOMO
SBS	Chr2	28829084	C-G	HOMO
SBS	Chr2	8631246	A-G	HET
SBS	Chr3	10054962	T-G	HOMO
SBS	Chr3	24098351	A-C	HET	LOC_Os03g43210
SBS	Chr5	12276076	G-C	HOMO	LOC_Os05g20900
SBS	Chr5	24041814	C-A	HET
SBS	Chr5	25413334	C-T	HET
SBS	Chr5	5779965	T-C	HOMO
SBS	Chr5	7925062	T-C	HET
SBS	Chr6	11431794	G-C	HOMO
SBS	Chr6	22677815	C-T	HET
SBS	Chr6	7823488	G-A	HET
SBS	Chr6	9417327	C-T	HET
SBS	Chr7	26030556	C-T	HET	LOC_Os07g43490
SBS	Chr7	6612377	A-C	HOMO
SBS	Chr7	6614335	A-G	HOMO
SBS	Chr8	10170675	T-C	HET
SBS	Chr8	12012239	T-C	HET
SBS	Chr8	5062670	C-T	HET
SBS	Chr8	5068396	T-C	HET
SBS	Chr9	12852794	C-T	HET
SBS	Chr9	20732184	T-C	HET
SBS	Chr9	7005567	T-A	HET	LOC_Os09g12290
SBS	Chr9	7314301	G-T	HET

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	1955162	1955162	1
Deletion	Chr1	3800875	3800915	41
Deletion	Chr9	4132712	4132713	2	LOC_Os09g08020
Deletion	Chr1	4766630	4766631	2
Deletion	Chr4	5878983	5878983	1
Deletion	Chr12	6012983	6013054	72
Deletion	Chr10	6269490	6269490	1
Deletion	Chr12	6337178	6337178	1
Deletion	Chr5	9775982	9776005	24
Deletion	Chr4	10480516	10480693	178	LOC_Os04g18840
Deletion	Chr10	10570001	10708000	138000	22
Deletion	Chr10	10711001	10790000	79000	9
Deletion	Chr2	10755880	10755880	1
Deletion	Chr10	10921001	10946000	25000	4
Deletion	Chr8	11128735	11128736	2
Deletion	Chr9	13125482	13125482	1
Deletion	Chr7	13382260	13382265	6
Deletion	Chr1	14570113	14570169	57	LOC_Os01g25700
Deletion	Chr7	16904001	16930000	26000	2
Deletion	Chr11	17371422	17371424	3
Deletion	Chr5	17405841	17405929	89
Deletion	Chr2	17972394	17972449	56
Deletion	Chr11	18259414	18259422	9
Deletion	Chr11	18945936	18945936	1
Deletion	Chr11	19201923	19201928	6
Deletion	Chr9	20556934	20556937	4
Deletion	Chr1	21628875	21628875	1
Deletion	Chr12	22412001	22513000	101000	16
Deletion	Chr6	22495637	22495643	7
Deletion	Chr5	26940669	26940669	1
Deletion	Chr3	26945022	26945047	26	LOC_Os03g47600
Deletion	Chr12	26973150	26973150	1	LOC_Os12g43480
Deletion	Chr4	29950768	29950772	5
Deletion	Chr2	32107691	32107695	5

Insertions: 16

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr10	16610018	16610018	1
Insertion	Chr11	15381799	15381801	3
Insertion	Chr11	28187815	28187817	3	LOC_Os11g46910
Insertion	Chr12	20711488	20711489	2
Insertion	Chr12	26964421	26964421	1	LOC_Os12g43460
Insertion	Chr3	2540089	2540089	1
Insertion	Chr3	25528262	25528282	21
Insertion	Chr4	12445664	12445664	1
Insertion	Chr5	7413954	7414028	75
Insertion	Chr6	28167200	28167214	15
Insertion	Chr6	3485271	3485271	1
Insertion	Chr6	8315120	8315120	1
Insertion	Chr7	10174028	10174028	1	LOC_Os07g17250
Insertion	Chr7	25658154	25658154	1
Insertion	Chr7	8634700	8634811	112
Insertion	Chr8	13781236	13781237	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr10	10336187	10336293
Inversion	Chr2	24090695	24394191
Inversion	Chr2	24090701	24393715

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	22411725	Chr4	17275100
Translocation	Chr12	22412018	Chr4	17275091

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