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Mutant Information

Variant Information

Single base substitutions: 38

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	34109083	A-T	HOMO
SBS	Chr2	5292363	C-G	HET
SBS	Chr2	6498393	T-C	HET
SBS	Chr2	21700303	G-A	HET	LOC_Os02g36080
SBS	Chr3	2385821	G-T	HET
SBS	Chr3	15420037	C-T	HOMO
SBS	Chr3	34901095	C-T	HOMO
SBS	Chr4	1778469	T-A	HET
SBS	Chr4	2961121	T-C	HET	LOC_Os04g05770
SBS	Chr4	6863127	C-A	HET
SBS	Chr4	22156698	A-C	HET
SBS	Chr4	23843702	C-T	HOMO
SBS	Chr4	24528270	C-A	HOMO	LOC_Os04g41340
SBS	Chr5	20279755	C-A	HET
SBS	Chr6	9529032	C-A	HET
SBS	Chr6	13259379	G-A	HET	LOC_Os06g22770
SBS	Chr6	13677283	T-A	HET
SBS	Chr6	14593327	C-T	HET
SBS	Chr6	14669200	C-A	HET
SBS	Chr6	21188529	G-A	HET
SBS	Chr6	28507888	T-A	HET	LOC_Os06g47000
SBS	Chr7	21398913	G-A	HET
SBS	Chr7	28998700	G-A	HET	LOC_Os07g48470
SBS	Chr9	323641	T-C	HET
SBS	Chr9	5414581	A-T	HET
SBS	Chr9	16180244	A-T	HET
SBS	Chr10	15498958	G-A	HET	LOC_Os10g29810
SBS	Chr10	18936804	C-T	HET	LOC_Os10g35436
SBS	Chr10	20263069	A-C	HET
SBS	Chr11	6352055	G-T	HET
SBS	Chr11	10048028	T-A	HET
SBS	Chr11	11171051	G-A	HET
SBS	Chr11	24262672	T-A	HET
SBS	Chr12	1334016	T-C	HET
SBS	Chr12	1879384	G-T	HET
SBS	Chr12	2199888	G-A	HET
SBS	Chr12	4552027	G-A	HET
SBS	Chr12	22953363	G-T	HOMO	LOC_Os12g37390

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	2076782	2076790	9
Deletion	Chr6	2221925	2221931	7
Deletion	Chr8	2449175	2449207	33	LOC_Os08g04850
Deletion	Chr3	2894085	2894085	1
Deletion	Chr7	3401664	3401664	1
Deletion	Chr4	3968227	3968227	1	LOC_Os04g07470
Deletion	Chr11	3984043	3984043	1
Deletion	Chr5	4421241	4421241	1
Deletion	Chr2	4634040	4634054	15
Deletion	Chr8	4668863	4668869	7
Deletion	Chr8	6706049	6706049	1
Deletion	Chr4	9401837	9401837	1
Deletion	Chr11	9701675	9701676	2
Deletion	Chr9	9750254	9750254	1
Deletion	Chr4	9819918	9819926	9
Deletion	Chr12	11689740	11689744	5
Deletion	Chr11	12115008	12115010	3
Deletion	Chr10	12752767	12752767	1
Deletion	Chr4	14013733	14013750	18
Deletion	Chr9	14183350	14183352	3
Deletion	Chr9	14468343	14468345	3	LOC_Os09g24330
Deletion	Chr3	14986715	14986717	3
Deletion	Chr5	15344458	15344465	8
Deletion	Chr10	15519744	15519806	63
Deletion	Chr12	15701272	15701272	1
Deletion	Chr12	17143724	17143724	1
Deletion	Chr1	19646812	19646815	4
Deletion	Chr11	20210311	20210313	3	LOC_Os11g34500
Deletion	Chr10	20976447	20976447	1
Deletion	Chr11	21925517	21925518	2
Deletion	Chr12	21934875	21934875	1
Deletion	Chr2	22583688	22583688	1	2
Deletion	Chr8	28232745	28232747	3
Deletion	Chr1	34070429	34070430	2

Insertions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr2	16230649	16230649	1
Insertion	Chr3	216314	216325	12
Insertion	Chr3	3839645	3839702	58
Insertion	Chr3	13471993	13471995	3
Insertion	Chr4	16586384	16586416	33	LOC_Os04g28090
Insertion	Chr4	20156728	20156746	19
Insertion	Chr4	33911351	33911351	1
Insertion	Chr5	9406054	9406065	12	LOC_Os05g16590
Insertion	Chr5	19391847	19391853	7
Insertion	Chr6	18388025	18388055	31
Insertion	Chr6	23088669	23088670	2
Insertion	Chr6	28607046	28607071	26
Insertion	Chr7	6535574	6535574	1
Insertion	Chr7	8638586	8638586	1
Insertion	Chr7	11392750	11392750	1
Insertion	Chr8	9919937	9919974	38	LOC_Os08g16255
Insertion	Chr8	11233406	11233411	6
Insertion	Chr8	20333407	20333407	1	LOC_Os08g32800
Insertion	Chr10	10739870	10739888	19
Insertion	Chr10	15560826	15560826	1
Insertion	Chr11	7140641	7140642	2
Insertion	Chr11	14431284	14431286	3
Insertion	Chr11	27265431	27265465	35
Insertion	Chr12	6752095	6752111	17
Insertion	Chr12	6827366	6827366	1
Insertion	Chr12	12661766	12661766	1
Insertion	Chr12	13141480	13141553	74
Insertion	Chr3	26407540	26407540	1

Inversions: 7

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr8	2068790	2068881
Inversion	Chr8	18226441	18226552
Inversion	Chr10	20268811	20975415
Inversion	Chr10	20807533	20978712
Inversion	Chr4	24537492	25281519
Inversion	Chr4	24537499	25281518
Inversion	Chr2	25785251	25785513

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr8	2502963	Chr3	16563079
Translocation	Chr5	4253375	Chr4	32702662
Translocation	Chr5	4254354	Chr4	32702670

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