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Mutant Information

Variant Information

Single base substitutions: 21

Variant Type	Chromosome	Position	Change	Genotype	Effect	Gene Affected
SBS	Chr1	22706453	C-T	HOMO	SYNONYMOUS_CODING
SBS	Chr1	30418629	T-A	HET	INTERGENIC
SBS	Chr2	4913807	T-A	HET	INTERGENIC
SBS	Chr2	16978207	C-A	HOMO	INTERGENIC
SBS	Chr2	30370446	C-T	HOMO	INTERGENIC
SBS	Chr3	8198033	A-C	HOMO	INTRON
SBS	Chr3	24583984	C-A	HET	INTERGENIC
SBS	Chr3	24583985	C-T	HET	INTERGENIC
SBS	Chr4	2455502	T-C	HET	INTERGENIC
SBS	Chr4	5030912	G-A	HET	INTERGENIC
SBS	Chr4	9508444	T-C	HET	NON_SYNONYMOUS_CODING	LOC_Os04g17360
SBS	Chr5	20195333	T-C	HET	INTERGENIC
SBS	Chr7	3213730	G-A	HET	UTR_3_PRIME
SBS	Chr8	1711758	C-A	HET	NON_SYNONYMOUS_CODING	LOC_Os08g03620
SBS	Chr8	2248551	C-A	HET	INTERGENIC
SBS	Chr8	4236687	C-A	HOMO	INTERGENIC
SBS	Chr9	2980270	A-C	HET	INTERGENIC
SBS	Chr9	11936513	G-A	HET	NON_SYNONYMOUS_CODING	LOC_Os09g19940
SBS	Chr10	17516789	G-T	HET	INTERGENIC
SBS	Chr12	6909787	A-G	HET	INTRON
SBS	Chr12	16889012	G-T	HET	INTERGENIC

Deletions: 11

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	883299	883310	11
Deletion	Chr10	2332001	2413000	81000	11
Deletion	Chr12	6923305	6923306	1
Deletion	Chr6	9021231	9021245	14
Deletion	Chr1	10707599	10707603	4
Deletion	Chr11	18246972	18246974	2
Deletion	Chr10	19490001	19501000	11000	3
Deletion	Chr12	21692644	21692652	8	LOC_Os12g35670
Deletion	Chr4	24916161	24916163	2
Deletion	Chr5	25849196	25849197	1
Deletion	Chr4	28707516	28707527	11	LOC_Os04g48200

Insertions: 2

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	34064088	34064089	2
Insertion	Chr5	20294655	20294656	2

No Inversion

Translocations: 5

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr12	3565673	Chr10	2412555
Translocation	Chr12	3566696	Chr10	2413787
Translocation	Chr7	5265550	Chr3	27165207	LOC_Os07g09900
Translocation	Chr8	7565239	Chr6	15609190	LOC_Os06g27580
Translocation	Chr12	22142662	Chr6	13307777

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