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Mutant Information

Variant Information

Single base substitutions: 36

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	33013414	G-T	HET
SBS	Chr1	5185032	G-A	HET
SBS	Chr10	1274939	G-T	HET
SBS	Chr10	1274940	C-A	HET
SBS	Chr10	17667383	T-C	HET
SBS	Chr10	20280358	G-A	HET
SBS	Chr11	12690201	G-A	HET	LOC_Os11g22100
SBS	Chr11	16726608	C-T	HET
SBS	Chr11	1942405	T-A	HET
SBS	Chr11	19516589	A-G	HET
SBS	Chr11	27257793	C-G	HOMO
SBS	Chr12	10280209	G-T	HET
SBS	Chr12	4452991	A-G	HET
SBS	Chr2	10241212	A-G	HET
SBS	Chr2	21092324	A-G	HET
SBS	Chr2	26027789	C-G	HET
SBS	Chr2	6634294	G-A	HET
SBS	Chr2	6634295	C-T	HET
SBS	Chr3	28661286	C-T	HET
SBS	Chr3	28940889	C-T	HET
SBS	Chr3	28984926	A-G	HOMO
SBS	Chr3	32485223	T-C	HET	LOC_Os03g57020
SBS	Chr4	16897980	G-A	HOMO
SBS	Chr4	21638654	T-A	HET
SBS	Chr5	17390598	T-G	HET	LOC_Os05g30060
SBS	Chr5	22398785	C-A	HET	LOC_Os05g38190
SBS	Chr5	23039474	G-A	HET
SBS	Chr5	26374021	G-A	HET
SBS	Chr5	786530	T-C	HET
SBS	Chr6	28782381	G-C	HOMO
SBS	Chr8	18617394	T-G	HET
SBS	Chr8	19977059	T-A	HET	LOC_Os08g32240
SBS	Chr8	23983605	G-A	HET
SBS	Chr9	10773994	A-C	HOMO
SBS	Chr9	20118377	A-C	HET
SBS	Chr9	7350790	G-T	HOMO	LOC_Os09g12800

Deletions: 32

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr3	587433	587433	1
Deletion	Chr8	781081	781081	1
Deletion	Chr7	2928704	2928704	1
Deletion	Chr2	4468463	4468463	1
Deletion	Chr8	4911835	4911835	1
Deletion	Chr12	5640680	5640680	1
Deletion	Chr3	6674069	6674069	1
Deletion	Chr2	8951001	9263000	312000	43
Deletion	Chr4	9821550	9821554	5
Deletion	Chr7	10027937	10027937	1	LOC_Os07g17030
Deletion	Chr8	11012203	11012204	2
Deletion	Chr11	11996780	11996780	1
Deletion	Chr8	13015583	13015583	1
Deletion	Chr2	13090647	13090647	1
Deletion	Chr11	15738570	15738575	6
Deletion	Chr6	16047394	16047461	68
Deletion	Chr4	16683902	16683911	10
Deletion	Chr8	17305143	17305155	13	LOC_Os08g28360
Deletion	Chr10	18630001	18742000	112000	21
Deletion	Chr10	18881001	18910000	29000	8
Deletion	Chr9	20176168	20176208	41
Deletion	Chr10	20402589	20402589	1
Deletion	Chr2	21079701	21079701	1
Deletion	Chr5	21863696	21863696	1
Deletion	Chr4	21995775	21995779	5
Deletion	Chr5	25298427	25298432	6	LOC_Os05g43520
Deletion	Chr11	25530968	25530968	1
Deletion	Chr6	25806055	25806055	1	LOC_Os06g42950
Deletion	Chr7	26308311	26308311	1	LOC_Os07g44010
Deletion	Chr1	26379274	26379274	1
Deletion	Chr5	29941679	29941679	1
Deletion	Chr1	36614284	36614287	4

Insertions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	2797500	2797616	117
Insertion	Chr1	4185094	4185094	1
Insertion	Chr10	20977113	20977113	1
Insertion	Chr10	2477980	2478016	37
Insertion	Chr11	790137	790137	1
Insertion	Chr11	7920716	7920717	2
Insertion	Chr2	12409836	12409844	9
Insertion	Chr2	13661073	13661073	1
Insertion	Chr2	24066660	24066788	129
Insertion	Chr2	24448708	24448708	1
Insertion	Chr3	23141900	23141905	6
Insertion	Chr4	26456788	26456790	3
Insertion	Chr4	35486289	35486289	1
Insertion	Chr5	17221409	17221525	117
Insertion	Chr5	6123378	6123379	2
Insertion	Chr5	6127134	6127134	1
Insertion	Chr6	28763937	28763939	3	LOC_Os06g47510
Insertion	Chr7	21071787	21071881	95
Insertion	Chr7	26337083	26337189	107
Insertion	Chr8	10992755	10992755	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr8	8106963	8107116	LOC_Os08g13630
Inversion	Chr2	11343472	11343581
Inversion	Chr10	18632408	18880917
Inversion	Chr12	21772582	21772698
Inversion	Chr1	32475935	32476112	LOC_Os01g56350

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr10	20767587	Chr1	30620216
Translocation	Chr10	20767590	Chr1	30620220
Translocation	Chr5	27825501	Chr2	11342526

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