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Mutant Information

Variant Information

Single base substitutions: 29

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	4460845	G-T	HET
SBS	Chr1	15572526	A-G	HET
SBS	Chr2	3059407	T-C	HET
SBS	Chr2	11237101	G-A	HOMO
SBS	Chr4	188492	A-T	HET
SBS	Chr4	4384322	G-A	HET
SBS	Chr4	8015295	G-A	HET
SBS	Chr4	8694523	T-C	HET	LOC_Os04g16010
SBS	Chr4	26684870	G-A	HET
SBS	Chr5	6400465	C-G	HET
SBS	Chr5	11483980	G-T	HET
SBS	Chr5	23691883	G-T	HET
SBS	Chr5	23691887	A-G	HET
SBS	Chr5	27476596	G-A	HET
SBS	Chr6	7720930	G-A	HET
SBS	Chr6	12062646	C-T	HET
SBS	Chr6	12062649	A-G	HET
SBS	Chr7	10615827	A-T	HET
SBS	Chr7	16599987	A-G	HOMO
SBS	Chr8	6467691	G-C	HET	LOC_Os08g10970
SBS	Chr9	3225930	T-A	HET
SBS	Chr9	12584606	G-T	HET
SBS	Chr9	17896003	T-C	HOMO
SBS	Chr10	22156516	G-T	HET
SBS	Chr11	6881346	A-G	HET
SBS	Chr11	11091659	T-C	HET
SBS	Chr11	17357630	G-A	HET	LOC_Os11g29880
SBS	Chr12	8034521	T-A	HOMO
SBS	Chr12	26458426	A-T	HET

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr1	88855	88855	1
Deletion	Chr11	379405	379405	1	LOC_Os11g01700
Deletion	Chr9	4616086	4616107	22
Deletion	Chr9	4819910	4819910	1
Deletion	Chr10	5355210	5355210	1
Deletion	Chr10	6221841	6221850	10
Deletion	Chr1	9191328	9191328	1
Deletion	Chr6	9194740	9194740	1
Deletion	Chr1	9535432	9535437	6	LOC_Os01g16780
Deletion	Chr6	9666984	9666988	5
Deletion	Chr4	9799757	9799759	3	LOC_Os04g17850
Deletion	Chr7	12144892	12144892	1
Deletion	Chr3	12665268	12665273	6	LOC_Os03g22100
Deletion	Chr5	12803863	12803863	1
Deletion	Chr1	13719803	13719803	1
Deletion	Chr8	13832884	13832970	87
Deletion	Chr2	14239452	14239471	20
Deletion	Chr4	15242018	15242196	179
Deletion	Chr4	15442319	15442322	4
Deletion	Chr4	15495314	15495326	13
Deletion	Chr1	16855008	16855008	1
Deletion	Chr8	17058106	17058155	50
Deletion	Chr3	19621763	19621763	1	LOC_Os03g35390
Deletion	Chr3	20095015	20095016	2
Deletion	Chr7	21549231	21549232	2
Deletion	Chr9	21711294	21711309	16
Deletion	Chr3	21884197	21884197	1
Deletion	Chr6	22243001	22275000	32000	7
Deletion	Chr4	25150772	25150776	5
Deletion	Chr7	29583436	29583443	8
Deletion	Chr3	29966319	29966319	1
Deletion	Chr2	32760005	32760005	1	LOC_Os02g53540
Deletion	Chr3	34137186	34137202	17
Deletion	Chr1	37455825	37455825	1

Insertions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	22222758	22222806	49
Insertion	Chr2	9806793	9806848	56
Insertion	Chr4	7415802	7415802	1	LOC_Os04g13340
Insertion	Chr6	9741689	9741689	1
Insertion	Chr7	7802896	7802896	1
Insertion	Chr8	14654201	14654201	1	LOC_Os08g24280
Insertion	Chr9	9030651	9030653	3
Insertion	Chr10	14930423	14930514	92
Insertion	Chr10	15151619	15151641	23	LOC_Os10g29090
Insertion	Chr11	4872373	4872374	2
Insertion	Chr11	18016892	18016893	2
Insertion	Chr12	13936907	13936907	1
Insertion	Chr6	10791371	10791371	1

Inversions: 4

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	206289	257895
Inversion	Chr3	257904	521765
Inversion	Chr8	5250302	5269307	LOC_Os08g09030
Inversion	Chr8	5250313	5269306	LOC_Os08g09030

No Translocation

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