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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	19270505	A-G	HOMO
SBS	Chr1	22560757	G-A	HET
SBS	Chr10	11692570	G-A	HET
SBS	Chr10	22394908	A-G	HET	LOC_Os10g41590
SBS	Chr10	9729182	G-A	HOMO
SBS	Chr11	20880163	C-T	HET
SBS	Chr12	12800255	G-A	HOMO	LOC_Os12g22660
SBS	Chr12	22595873	C-T	HOMO
SBS	Chr2	13309374	C-T	HET
SBS	Chr2	13842075	C-T	HET
SBS	Chr5	12232623	C-G	HET
SBS	Chr5	18996643	G-A	HET	LOC_Os05g32500
SBS	Chr5	2648965	G-A	HET
SBS	Chr6	16355701	A-G	HET
SBS	Chr6	21776543	C-T	HOMO	LOC_Os06g36960
SBS	Chr6	29224565	A-G	HET
SBS	Chr7	26174665	C-T	HET
SBS	Chr7	29504032	G-A	HET
SBS	Chr7	8756042	T-A	HET
SBS	Chr7	8756044	T-C	HET
SBS	Chr9	12100202	T-A	HET
SBS	Chr9	16189837	T-A	HET
SBS	Chr9	16189858	T-C	HET
SBS	Chr9	5098010	T-C	HET

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	277220	277225	6
Deletion	Chr5	682914	682914	1
Deletion	Chr10	1677201	1677202	2
Deletion	Chr5	1972519	1972526	8	LOC_Os05g04330
Deletion	Chr5	2266265	2266267	3
Deletion	Chr6	2637760	2637760	1
Deletion	Chr3	3296411	3296411	1
Deletion	Chr8	3785160	3785161	2
Deletion	Chr12	4654338	4654338	1	LOC_Os12g08920
Deletion	Chr9	5563905	5563905	1	LOC_Os09g10220
Deletion	Chr10	6441113	6441113	1	LOC_Os10g11672
Deletion	Chr2	7386957	7386957	1
Deletion	Chr10	9123212	9123218	7
Deletion	Chr11	12095930	12095932	3
Deletion	Chr10	14212029	14212029	1
Deletion	Chr2	14577180	14577180	1
Deletion	Chr8	14630440	14630499	60
Deletion	Chr4	14689532	14689532	1
Deletion	Chr9	15191959	15191959	1	LOC_Os09g25360
Deletion	Chr3	17292463	17292474	12
Deletion	Chr9	19234821	19234821	1
Deletion	Chr7	19361527	19361528	2
Deletion	Chr12	19624478	19624483	6
Deletion	Chr12	20095269	20095275	7
Deletion	Chr9	21402967	21402970	4
Deletion	Chr4	21939874	21939877	4
Deletion	Chr1	22262119	22262137	19
Deletion	Chr12	22889368	22889370	3
Deletion	Chr11	26026452	26026455	4
Deletion	Chr5	26135339	26135339	1
Deletion	Chr6	26878295	26878313	19	LOC_Os06g44500
Deletion	Chr6	27081999	27082008	10
Deletion	Chr2	28591077	28591082	6
Deletion	Chr3	29941449	29941449	1

Insertions: 19

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	15914629	15914629	1
Insertion	Chr1	28505451	28505452	2
Insertion	Chr10	5005559	5005581	23
Insertion	Chr10	5352095	5352095	1	LOC_Os10g09880
Insertion	Chr11	12097978	12098057	80
Insertion	Chr11	19874652	19874776	125
Insertion	Chr12	17396461	17396475	15
Insertion	Chr12	18512029	18512080	52
Insertion	Chr12	6407756	6407758	3
Insertion	Chr2	19611629	19611734	106
Insertion	Chr2	8272569	8272610	42
Insertion	Chr3	31990768	31990768	1
Insertion	Chr3	34562926	34563016	91
Insertion	Chr4	12523350	12523350	1
Insertion	Chr4	19532256	19532258	3
Insertion	Chr4	22659404	22659404	1
Insertion	Chr4	26609387	26609387	1
Insertion	Chr4	30744429	30744429	1
Insertion	Chr7	4739689	4739689	1

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr3	702650	702829
Inversion	Chr11	1701633	1701839
Inversion	Chr4	2177725	3013212
Inversion	Chr1	8102034	8570946	2
Inversion	Chr1	8102037	8570945	2
Inversion	Chr10	23033595	23033666

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2
Translocation	Chr8	6367819	Chr3	13505001
Translocation	Chr8	7324224	Chr6	7290235
Translocation	Chr7	12625770	Chr2	32638525

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