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Mutant Information

Variant Information

Single base substitutions: 28

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	5115912	C-T	HET
SBS	Chr1	41426883	G-A	HET
SBS	Chr2	11510368	G-A	HET
SBS	Chr2	12954123	C-G	HET
SBS	Chr3	4684695	A-G	HET
SBS	Chr3	7543602	T-G	HET	LOC_Os03g13910
SBS	Chr4	5377620	C-T	HET
SBS	Chr4	16754619	G-A	HET
SBS	Chr5	7202788	T-A	HET
SBS	Chr5	18165753	C-A	HET
SBS	Chr5	18603419	T-C	HOMO
SBS	Chr6	12359414	C-A	HET
SBS	Chr6	16446027	G-A	HET
SBS	Chr6	21582104	T-C	HET
SBS	Chr6	23517673	T-A	HOMO
SBS	Chr6	23517674	C-A	HOMO
SBS	Chr6	23517675	T-A	HOMO
SBS	Chr7	1443339	G-A	HET
SBS	Chr7	24945417	G-A	HET
SBS	Chr7	25556458	C-T	HET
SBS	Chr9	17576419	C-A	HET
SBS	Chr10	2803061	G-T	HET
SBS	Chr12	8237978	C-T	HET
SBS	Chr12	8468431	A-T	HET
SBS	Chr12	8468432	C-T	HET	LOC_Os12g14800
SBS	Chr12	9653466	G-A	HET
SBS	Chr12	23487000	C-A	HET
SBS	Chr12	25348725	C-T	HET

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr10	241085	241086	2
Deletion	Chr10	1663514	1663514	1
Deletion	Chr12	1674306	1674316	11
Deletion	Chr12	1756740	1756742	3	LOC_Os12g04180
Deletion	Chr10	3145218	3145218	1
Deletion	Chr9	3662389	3662393	5	LOC_Os09g07360
Deletion	Chr12	3854596	3854614	19
Deletion	Chr1	4187051	4187052	2
Deletion	Chr5	4868131	4868133	3	LOC_Os05g08820
Deletion	Chr7	7013246	7013255	10
Deletion	Chr9	8322736	8322746	11
Deletion	Chr1	9574968	9574970	3
Deletion	Chr10	12723197	12723241	45
Deletion	Chr8	12985850	12986005	156
Deletion	Chr7	14002789	14002789	1
Deletion	Chr6	17093760	17093770	11
Deletion	Chr10	17356277	17356327	51
Deletion	Chr5	19171521	19171521	1
Deletion	Chr8	19824491	19824498	8
Deletion	Chr7	24845170	24845172	3	LOC_Os07g41460
Deletion	Chr1	30358655	30358655	1

Insertions: 8

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	2738328	2738328	1
Insertion	Chr2	23341540	23341540	1
Insertion	Chr4	8954973	8954973	1
Insertion	Chr4	25990439	25990440	2
Insertion	Chr6	9491066	9491069	4
Insertion	Chr7	3555716	3555723	8
Insertion	Chr8	15008650	15008720	71
Insertion	Chr11	27751458	27751459	2

Inversions: 6

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	4632199	5463520
Inversion	Chr10	4632214	5463524
Inversion	Chr4	7523729	7529253
Inversion	Chr5	28381794	28389594	LOC_Os05g49510
Inversion	Chr5	28381806	28389594	LOC_Os05g49510
Inversion	Chr1	30616659	31141610	LOC_Os01g54150

Translocations: 3

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	6183989	Chr3	32355383
Translocation	Chr7	6184207	Chr3	32355380
Translocation	Chr5	29707224	Chr2	18202521	2

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