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Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	11507225	C-A	HET
SBS	Chr1	21744868	T-C	HET
SBS	Chr1	3064275	T-A	HET
SBS	Chr1	37513410	T-C	HET
SBS	Chr10	20921731	T-A	HET
SBS	Chr10	3145218	C-T	HET
SBS	Chr11	13408602	C-T	HOMO
SBS	Chr11	16470264	T-C	HET	LOC_Os11g28550
SBS	Chr11	17333079	A-G	HET
SBS	Chr11	27341695	G-A	HOMO
SBS	Chr11	4760277	G-T	HET
SBS	Chr12	4099280	T-C	HET
SBS	Chr12	4616830	G-A	HET
SBS	Chr2	15076546	A-T	HET
SBS	Chr2	18790841	A-T	HET
SBS	Chr3	7427485	A-G	HET
SBS	Chr4	13847489	G-C	HET	LOC_Os04g24200
SBS	Chr4	21327	G-A	HET
SBS	Chr4	29978568	C-A	HET
SBS	Chr4	34436940	C-G	HOMO
SBS	Chr5	11803216	G-A	HET
SBS	Chr5	28985792	G-A	HET
SBS	Chr5	28985804	T-A	HET
SBS	Chr5	3079607	A-T	HET
SBS	Chr6	13860419	A-G	HET
SBS	Chr6	8549887	G-A	HET
SBS	Chr6	9017711	G-T	HET
SBS	Chr7	16834270	G-A	HET
SBS	Chr7	3656999	T-C	HET
SBS	Chr7	4796636	G-A	HET
SBS	Chr8	13998694	G-T	HET
SBS	Chr8	17171795	G-A	HET
SBS	Chr8	1971378	G-A	HET	LOC_Os08g04060
SBS	Chr8	25927517	C-A	HET
SBS	Chr8	27098744	G-C	HET
SBS	Chr9	13521505	C-T	HOMO
SBS	Chr9	3470724	T-C	HET
SBS	Chr9	4385309	A-G	HET
SBS	Chr9	6300618	C-T	HET

Deletions: 28

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	3421877	3421881	5
Deletion	Chr11	3436001	3462000	26000	4
Deletion	Chr11	5548782	5549200	419
Deletion	Chr12	6760554	6760556	3	LOC_Os12g12300
Deletion	Chr7	6878763	6878763	1
Deletion	Chr1	6939009	6939011	3
Deletion	Chr10	7718494	7718494	1
Deletion	Chr8	7759047	7759050	4
Deletion	Chr4	8030837	8030848	12
Deletion	Chr7	9553130	9553141	12
Deletion	Chr2	15212001	15382000	170000	24
Deletion	Chr8	15682918	15682919	2	LOC_Os08g25760
Deletion	Chr2	16183148	16183151	4
Deletion	Chr8	16590839	16590843	5
Deletion	Chr8	17028296	17028296	1	LOC_Os08g27940
Deletion	Chr2	17696533	17696580	48
Deletion	Chr2	21196936	21196936	1
Deletion	Chr7	22054665	22054666	2
Deletion	Chr8	23549959	23549959	1
Deletion	Chr3	24412944	24412944	1
Deletion	Chr12	24968799	24968799	1
Deletion	Chr4	25220379	25220440	62
Deletion	Chr2	25656396	25656396	1
Deletion	Chr11	27615479	27615488	10
Deletion	Chr5	28325194	28325194	1
Deletion	Chr3	30099406	30099406	1
Deletion	Chr4	34309501	34309501	1
Deletion	Chr1	37356918	37356920	3

Insertions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	19715307	19715307	1
Insertion	Chr1	37261682	37261682	1	LOC_Os01g64150
Insertion	Chr11	26893782	26893785	4
Insertion	Chr11	4859045	4859131	87
Insertion	Chr12	19140841	19140895	55
Insertion	Chr2	8355544	8355595	52
Insertion	Chr3	11687382	11687415	34
Insertion	Chr3	35893052	35893052	1
Insertion	Chr4	18034108	18034108	1
Insertion	Chr5	23126717	23126718	2
Insertion	Chr7	24304128	24304133	6
Insertion	Chr8	14624669	14624670	2
Insertion	Chr9	7381922	7382031	110

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2
Inversion	Chr8	17435061	17704841
Inversion	Chr8	17444829	17704845
Inversion	Chr3	21204712	21251852
Inversion	Chr3	24624270	24624475
Inversion	Chr6	24891775	24891895

Translocations: 13

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr5	2982203	Chr3	23818671
Translocation	Chr11	3462058	Chr3	23818675
Translocation	Chr11	3462620	Chr5	2981603
Translocation	Chr8	16014289	Chr3	31448090
Translocation	Chr8	16014295	Chr3	31474722	LOC_Os03g55320
Translocation	Chr9	16888601	Chr3	1630818	LOC_Os03g03670
Translocation	Chr9	16888604	Chr3	1630815	LOC_Os03g03670
Translocation	Chr8	17435071	Chr2	15208688
Translocation	Chr8	17444789	Chr3	21204703
Translocation	Chr3	21251840	Chr2	15210425
Translocation	Chr12	23537160	Chr4	22710983
Translocation	Chr6	24566457	Chr2	10397241
Translocation	Chr6	24566460	Chr2	10397653

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