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Mutant Information

Variant Information

Single base substitutions: 31

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	13511823	T-G	HET
SBS	Chr1	16279541	T-C	HET
SBS	Chr1	18171354	C-T	HET
SBS	Chr1	22995812	T-A	HET
SBS	Chr1	25428663	C-T	HOMO
SBS	Chr1	37446850	G-T	HET
SBS	Chr1	37581132	A-T	HET
SBS	Chr1	3834917	C-T	HET
SBS	Chr1	7085530	G-A	HET
SBS	Chr10	13339181	G-T	HOMO
SBS	Chr10	3568321	A-G	HET
SBS	Chr10	3568322	G-A	HET
SBS	Chr10	4856909	G-A	HET
SBS	Chr11	8630698	T-C	HET
SBS	Chr2	3915274	G-A	HOMO	LOC_Os02g07560
SBS	Chr3	21585530	T-C	HET
SBS	Chr3	28025643	A-T	HET
SBS	Chr4	12922331	G-A	HOMO
SBS	Chr4	12930109	G-A	HOMO	LOC_Os04g22830
SBS	Chr4	31086223	C-A	HET
SBS	Chr5	10115384	C-A	HET	LOC_Os05g17604
SBS	Chr7	12959553	G-C	HET
SBS	Chr7	13193545	C-T	HET
SBS	Chr7	3439949	G-A	HOMO
SBS	Chr7	5170820	G-C	HET
SBS	Chr7	859011	A-T	HET	LOC_Os07g02480
SBS	Chr8	11663614	G-A	HET
SBS	Chr8	12054101	C-T	HET
SBS	Chr8	8986135	G-A	HET
SBS	Chr9	12916657	T-G	HET
SBS	Chr9	12916661	G-C	HET

Deletions: 21

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr7	1584043	1584045	3	LOC_Os07g03790
Deletion	Chr5	1846433	1846435	3
Deletion	Chr8	1899687	1899692	6
Deletion	Chr10	2815275	2815276	2
Deletion	Chr7	3046169	3046179	11
Deletion	Chr3	3919821	3919828	8
Deletion	Chr9	6553001	6688000	135000	17
Deletion	Chr12	6892138	6892221	84
Deletion	Chr1	7158035	7158037	3
Deletion	Chr12	7769729	7769754	26
Deletion	Chr4	10694400	10694410	11
Deletion	Chr6	14639105	14639105	1
Deletion	Chr1	15495851	15495855	5	LOC_Os01g27760
Deletion	Chr11	15960001	16175000	215000	38
Deletion	Chr1	16075176	16075176	1
Deletion	Chr10	16180751	16180752	2
Deletion	Chr11	16184001	16247000	63000	8
Deletion	Chr11	16249001	16264000	15000	LOC_Os11g28270
Deletion	Chr3	32220283	32220290	8
Deletion	Chr2	34321654	34321683	30
Deletion	Chr3	34648001	34703000	55000	9

Insertions: 13

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	31814359	31814359	1
Insertion	Chr11	7230591	7230591	1
Insertion	Chr12	6019907	6019907	1
Insertion	Chr3	10005564	10005564	1
Insertion	Chr3	29690191	29690191	1	LOC_Os03g51770
Insertion	Chr5	8258085	8258106	22
Insertion	Chr6	1233526	1233527	2
Insertion	Chr6	21389882	21389882	1
Insertion	Chr7	8585877	8585877	1
Insertion	Chr8	1904959	1905046	88	LOC_Os08g03980
Insertion	Chr9	14665637	14665638	2
Insertion	Chr9	18331025	18331033	9
Insertion	Chr9	7763072	7763073	2

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr1	26941891	27272527	LOC_Os01g47680

Translocations: 4

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr7	757796	Chr1	27266609	LOC_Os01g47660
Translocation	Chr4	20307452	Chr1	10406962
Translocation	Chr12	25040772	Chr3	8305720
Translocation	Chr12	25040774	Chr3	8307502	LOC_Os03g15190

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