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Mutant Information

Variant Information

Single base substitutions: 50

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	13512782	T-C	HET
SBS	Chr1	17833819	G-T	HOMO
SBS	Chr1	19543803	G-A	HET
SBS	Chr1	22821180	C-T	HOMO
SBS	Chr1	42040793	C-T	HET
SBS	Chr10	19396763	T-A	HOMO
SBS	Chr10	2704203	A-T	HET
SBS	Chr10	29161	C-T	HET	LOC_Os10g01020
SBS	Chr10	7377285	A-T	HET
SBS	Chr10	7770954	T-C	HET
SBS	Chr11	11477660	G-A	HET
SBS	Chr11	15696720	T-G	HET
SBS	Chr11	23768054	C-A	HET	LOC_Os11g39870
SBS	Chr11	25185337	C-T	HET
SBS	Chr12	10271759	G-T	HOMO
SBS	Chr12	17990219	C-T	HET
SBS	Chr12	18183634	C-A	HET
SBS	Chr12	24690614	A-G	HET
SBS	Chr3	10953112	T-A	HET	LOC_Os03g19480
SBS	Chr3	11855575	A-T	HET
SBS	Chr3	18045559	T-G	HOMO
SBS	Chr3	32073736	C-A	HET
SBS	Chr3	32443260	T-A	HET	LOC_Os03g56960
SBS	Chr3	34602041	C-A	HET
SBS	Chr3	35247850	C-T	HET
SBS	Chr4	11137864	G-T	HET
SBS	Chr4	14570895	C-T	HET
SBS	Chr4	14637932	A-G	HET
SBS	Chr4	16150269	G-A	HET	LOC_Os04g27330
SBS	Chr4	1738007	G-A	HET
SBS	Chr4	28558098	A-G	HET
SBS	Chr4	28793212	C-T	HET
SBS	Chr4	33316833	A-T	HET	LOC_Os04g55940
SBS	Chr4	33561659	T-C	HET
SBS	Chr4	8878480	C-T	HET
SBS	Chr5	10917010	C-T	HET
SBS	Chr5	21350164	G-A	HET
SBS	Chr5	8570097	T-A	HET
SBS	Chr6	19422321	A-C	HET
SBS	Chr6	19422322	T-C	HET
SBS	Chr6	9865136	C-T	HET
SBS	Chr7	13318507	T-C	HET
SBS	Chr7	23644031	A-C	HET
SBS	Chr8	20106972	C-T	HOMO	LOC_Os08g32480
SBS	Chr8	20632961	G-T	HOMO
SBS	Chr8	6880125	G-A	HOMO
SBS	Chr9	14756658	G-A	HOMO
SBS	Chr9	20693709	A-G	HET
SBS	Chr9	20984043	T-C	HOMO	LOC_Os09g36360
SBS	Chr9	5495450	G-T	HOMO	LOC_Os09g10080

Deletions: 37

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr6	1316184	1316185	2
Deletion	Chr8	2626572	2626573	2
Deletion	Chr12	3465931	3465931	1
Deletion	Chr10	4358949	4358949	1	LOC_Os10g08040
Deletion	Chr6	7894842	7894865	24	LOC_Os06g14150
Deletion	Chr5	8837001	8852000	15000	6
Deletion	Chr5	8854001	8891000	37000	10
Deletion	Chr5	8894001	8925000	31000	7
Deletion	Chr5	8928001	8994000	66000	11
Deletion	Chr1	9188471	9188500	30
Deletion	Chr1	9706342	9706360	19
Deletion	Chr5	10059164	10059167	4
Deletion	Chr8	10588254	10588261	8
Deletion	Chr4	10818290	10818290	1
Deletion	Chr7	12181371	12181371	1
Deletion	Chr3	12925225	12925225	1
Deletion	Chr7	13857653	13857653	1
Deletion	Chr3	14861878	14861879	2
Deletion	Chr4	15328401	15328401	1
Deletion	Chr7	15508001	15549000	41000	5
Deletion	Chr7	15788680	15788681	2
Deletion	Chr11	15990007	15990015	9
Deletion	Chr11	15990191	15990195	5	LOC_Os11g27780
Deletion	Chr4	16170604	16170604	1
Deletion	Chr12	18230900	18230900	1	LOC_Os12g30360
Deletion	Chr6	18668898	18668900	3
Deletion	Chr6	20123500	20123501	2
Deletion	Chr2	20699001	20707000	8000	2
Deletion	Chr12	20762965	20762965	1
Deletion	Chr6	24770124	24770139	16
Deletion	Chr8	24857166	24857166	1
Deletion	Chr8	25934079	25934090	12
Deletion	Chr5	29371124	29371132	9	LOC_Os05g51200
Deletion	Chr5	29573553	29573568	16
Deletion	Chr4	32813218	32813234	17
Deletion	Chr4	35074674	35074676	3
Deletion	Chr1	37273308	37273308	1

Insertions: 20

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	11485742	11485743	2
Insertion	Chr1	25605462	25605545	84
Insertion	Chr10	22330426	22330426	1
Insertion	Chr12	11626172	11626178	7
Insertion	Chr12	16820876	16820876	1
Insertion	Chr2	26793248	26793265	18
Insertion	Chr2	31111224	31111265	42
Insertion	Chr2	3526193	3526193	1
Insertion	Chr3	33735681	33735681	1
Insertion	Chr5	3928278	3928278	1
Insertion	Chr6	1803642	1803642	1
Insertion	Chr6	18256280	18256357	78	LOC_Os06g31370
Insertion	Chr6	20213993	20214093	101
Insertion	Chr6	2306123	2306123	1
Insertion	Chr6	2586672	2586672	1
Insertion	Chr7	27342456	27342458	3	LOC_Os07g45810
Insertion	Chr7	6342962	6343010	49
Insertion	Chr8	18582607	18582681	75
Insertion	Chr8	3731944	3731944	1
Insertion	Chr9	16459840	16459840	1

Inversions: 2

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr4	29203460	29359054	LOC_Os04g48970
Inversion	Chr4	29359051	29426273	LOC_Os04g49300

No Translocation

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