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Mutant Information

Variant Information

Single base substitutions: 39

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	30371060	G-A	HET
SBS	Chr1	40628429	G-A	HOMO
SBS	Chr1	40794924	A-T	HOMO
SBS	Chr1	5231829	C-T	HET
SBS	Chr1	685940	G-C	HET
SBS	Chr1	7652125	C-T	HOMO
SBS	Chr10	14831817	G-A	HOMO
SBS	Chr10	16647766	C-T	HET
SBS	Chr10	811150	C-T	HOMO
SBS	Chr10	9563716	G-A	HET
SBS	Chr11	22315480	C-T	HET	LOC_Os11g37740
SBS	Chr11	23662139	C-T	HET
SBS	Chr12	13395882	C-T	HET
SBS	Chr12	2072197	G-A	HET	LOC_Os12g04830
SBS	Chr12	25880939	C-T	HET
SBS	Chr2	10905833	G-C	HOMO
SBS	Chr2	26423142	G-A	HOMO	LOC_Os02g43790
SBS	Chr2	34745276	G-A	HOMO
SBS	Chr2	35520546	G-A	HET
SBS	Chr3	11063838	C-T	HET
SBS	Chr3	12345744	A-C	HOMO
SBS	Chr3	19165014	A-T	HOMO
SBS	Chr3	6405043	C-T	HET
SBS	Chr4	23789074	A-T	HET
SBS	Chr4	3193082	C-G	HOMO
SBS	Chr6	14075131	A-G	HOMO
SBS	Chr6	20165192	G-A	HOMO
SBS	Chr7	23998368	G-A	HET
SBS	Chr7	7844806	C-T	HOMO
SBS	Chr7	9292859	C-A	HET
SBS	Chr8	22865101	C-T	HET
SBS	Chr8	24816658	G-T	HET
SBS	Chr8	24816659	A-T	HET
SBS	Chr8	25884364	C-T	HET
SBS	Chr8	3888860	G-A	HET
SBS	Chr8	679829	A-T	HET
SBS	Chr8	7248779	G-A	HET	LOC_Os08g12300
SBS	Chr9	14429432	G-A	HOMO
SBS	Chr9	14918145	C-T	HOMO	LOC_Os09g24970

Deletions: 34

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr8	316691	316691	1
Deletion	Chr10	1255092	1255092	1
Deletion	Chr8	2488402	2488460	59
Deletion	Chr9	4752489	4752504	16
Deletion	Chr5	4963797	4963806	10
Deletion	Chr10	5101993	5101998	6	LOC_Os10g09460
Deletion	Chr3	5126245	5126245	1
Deletion	Chr2	5496717	5496740	24
Deletion	Chr4	5671722	5671722	1
Deletion	Chr3	6645563	6645563	1
Deletion	Chr11	7265513	7265513	1
Deletion	Chr11	7359218	7359224	7	LOC_Os11g13430
Deletion	Chr6	7748723	7748731	9
Deletion	Chr6	10286510	10286528	19	LOC_Os06g17720
Deletion	Chr9	12694665	12694678	14
Deletion	Chr8	13644875	13644875	1
Deletion	Chr1	13815679	13815680	2
Deletion	Chr8	14090616	14090688	73
Deletion	Chr9	14918160	14918163	4	LOC_Os09g24970
Deletion	Chr3	15549832	15549832	1
Deletion	Chr12	16030093	16030093	1
Deletion	Chr7	16870530	16870533	4
Deletion	Chr6	17293178	17293195	18
Deletion	Chr2	18769626	18769626	1
Deletion	Chr3	19475341	19475341	1
Deletion	Chr12	24418299	24418302	4
Deletion	Chr6	26081981	26081994	14
Deletion	Chr1	26553398	26553399	2
Deletion	Chr4	29553725	29553725	1
Deletion	Chr4	29708752	29708752	1
Deletion	Chr1	31247855	31247856	2
Deletion	Chr1	36576610	36576612	3	LOC_Os01g63120
Deletion	Chr1	37215854	37215865	12
Deletion	Chr1	37697764	37697764	1

Insertions: 17

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	1099682	1099687	6
Insertion	Chr1	42536480	42536481	2
Insertion	Chr1	7913167	7913167	1
Insertion	Chr10	15079982	15079985	4
Insertion	Chr10	2142781	2142781	1
Insertion	Chr11	4338806	4338816	11
Insertion	Chr11	7140641	7140642	2
Insertion	Chr11	8563818	8563828	11	LOC_Os11g15180
Insertion	Chr2	19722099	19722099	1	LOC_Os02g33160
Insertion	Chr2	33684069	33684070	2
Insertion	Chr3	10340807	10340907	101
Insertion	Chr3	14672323	14672404	82
Insertion	Chr4	5456370	5456370	1
Insertion	Chr5	25978992	25978992	1
Insertion	Chr6	14261124	14261128	5
Insertion	Chr7	21915475	21915475	1
Insertion	Chr7	21969070	21969071	2

Inversions: 3

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr12	25208823	25586502
Inversion	Chr12	25208831	25586495
Inversion	Chr4	29073784	29074189	LOC_Os04g48750

Translocations: 1

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	4822263	Chr5	29699490	LOC_Os11g09080

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