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Mutant Information

Variant Information

Single base substitutions: 24

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	17593569	G-A	HOMO
SBS	Chr1	41861061	C-T	HET
SBS	Chr2	745707	A-G	HET
SBS	Chr2	12923258	C-G	HET
SBS	Chr3	27193136	G-A	HET
SBS	Chr3	29909475	G-C	HOMO
SBS	Chr3	30634702	T-A	HOMO
SBS	Chr4	4568386	G-A	HET
SBS	Chr4	17067382	T-A	HET	LOC_Os04g28820
SBS	Chr4	30638869	T-A	HET
SBS	Chr4	31494031	C-T	HET
SBS	Chr5	4496366	G-A	HET	LOC_Os05g08240
SBS	Chr5	29891456	A-T	HET
SBS	Chr6	3336879	T-A	HET
SBS	Chr6	3336880	G-A	HET
SBS	Chr6	25824085	C-T	HET	LOC_Os06g42980
SBS	Chr6	26050418	C-G	HET	LOC_Os06g43330
SBS	Chr6	27141193	T-A	HOMO	LOC_Os06g44890
SBS	Chr7	29522748	C-T	HET
SBS	Chr8	10814592	C-T	HET
SBS	Chr8	11742090	C-A	HET
SBS	Chr8	18583959	T-A	HOMO
SBS	Chr10	3517592	A-G	HOMO	LOC_Os10g06760
SBS	Chr11	24024455	C-T	HET

Deletions: 23

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr4	2633674	2633674	1
Deletion	Chr5	5098492	5098492	1
Deletion	Chr2	7206117	7206117	1
Deletion	Chr4	8229808	8229808	1
Deletion	Chr4	8604691	8604702	12	LOC_Os04g15850
Deletion	Chr4	10422025	10422025	1
Deletion	Chr5	12131073	12131073	1
Deletion	Chr12	13090058	13090059	2
Deletion	Chr8	13096380	13096380	1
Deletion	Chr5	14290558	14290558	1
Deletion	Chr3	14621362	14621362	1
Deletion	Chr10	16541076	16541077	2
Deletion	Chr9	16568143	16568143	1
Deletion	Chr9	18238487	18238487	1	LOC_Os09g29970
Deletion	Chr5	18257742	18257742	1
Deletion	Chr4	20571460	20571779	320
Deletion	Chr2	21115512	21115512	1	LOC_Os02g35150
Deletion	Chr12	21384362	21384362	1	LOC_Os12g35140
Deletion	Chr6	23246944	23246963	20
Deletion	Chr5	25866478	25866478	1
Deletion	Chr5	27653845	27653845	1
Deletion	Chr4	30357264	30357264	1
Deletion	Chr1	30443824	30443824	1	LOC_Os01g52950

Insertions: 25

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Insertion	Chr1	16890996	16890996	1
Insertion	Chr1	26666685	26666685	1
Insertion	Chr1	41112768	41112768	1
Insertion	Chr2	13595858	13595858	1
Insertion	Chr3	15789862	15789863	2
Insertion	Chr3	16474839	16474849	11	LOC_Os03g29020
Insertion	Chr4	3988999	3988999	1
Insertion	Chr4	29298726	29298805	80
Insertion	Chr5	10193672	10193672	1	LOC_Os05g17720
Insertion	Chr5	15980109	15980109	1	LOC_Os05g27480
Insertion	Chr6	15484703	15484703	1
Insertion	Chr7	7252105	7252105	1	LOC_Os07g12690
Insertion	Chr7	11089521	11089604	84
Insertion	Chr7	12893345	12893345	1
Insertion	Chr8	6861342	6861342	1
Insertion	Chr8	22256365	22256365	1
Insertion	Chr9	2167452	2167452	1
Insertion	Chr9	14225980	14225980	1
Insertion	Chr11	3249825	3249826	2
Insertion	Chr11	5721701	5721702	2
Insertion	Chr11	16277071	16277194	124
Insertion	Chr11	18437930	18438040	111	LOC_Os11g31550
Insertion	Chr12	15922813	15922814	2
Insertion	Chr6	12398587	12398588	2
Insertion	Chr12	14935424	14935424	1

Inversions: 5

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr6	15526584	16092094
Inversion	Chr6	15526605	16092097
Inversion	Chr2	18020934	18383969
Inversion	Chr2	18020949	18383984
Inversion	Chr2	35794835	35794987	LOC_Os02g58554

Translocations: 2

Variant Type	Chromosome	Position 1	Chromosome	Position 2	Number of Genes
Translocation	Chr11	2799211	Chr7	27201895	LOC_Os11g05940
Translocation	Chr11	2819585	Chr7	27201906

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