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Mutant Information

Variant Information

Single base substitutions: 34

Variant Type	Chromosome	Position	Change	Genotype	Gene Affected
SBS	Chr1	11358215	A-C	HET	LOC_Os01g19980
SBS	Chr1	15322915	A-T	HET
SBS	Chr1	17026678	C-G	HET
SBS	Chr1	42377024	A-T	HET
SBS	Chr2	21786554	G-A	HET
SBS	Chr2	26269191	C-T	HOMO
SBS	Chr2	27379833	C-T	HOMO
SBS	Chr2	33175907	C-T	HET
SBS	Chr3	1147781	A-C	HOMO
SBS	Chr3	14955497	C-T	HOMO
SBS	Chr3	15539401	G-A	HET
SBS	Chr3	16135192	C-T	HET
SBS	Chr3	23877916	T-C	HET
SBS	Chr3	26755136	C-T	HET
SBS	Chr3	28601992	C-A	HET	LOC_Os03g50150
SBS	Chr3	31377784	C-T	HET
SBS	Chr3	32607468	C-T	HET
SBS	Chr3	33058613	T-A	HET
SBS	Chr3	34355514	G-A	HOMO
SBS	Chr4	15177605	A-G	HET
SBS	Chr4	22642831	C-T	HET
SBS	Chr4	33511067	G-A	HOMO
SBS	Chr5	3204716	C-T	HET
SBS	Chr6	5070614	G-C	HET
SBS	Chr6	6215047	T-C	HET
SBS	Chr6	17687884	G-A	HET	LOC_Os06g30570
SBS	Chr6	28994801	C-T	HOMO	LOC_Os06g47940
SBS	Chr7	13780667	T-C	HET
SBS	Chr7	28643062	A-G	HOMO
SBS	Chr8	22907634	G-A	HET	LOC_Os08g36340
SBS	Chr9	14866074	C-T	HET
SBS	Chr11	23856752	C-T	HET
SBS	Chr11	23856753	C-T	HET
SBS	Chr12	26806715	A-G	HET

Deletions: 22

Variant Type	Chromosome	Start	End	Size (bp)	Number of Genes
Deletion	Chr9	211771	211772	2
Deletion	Chr1	1819920	1819921	2
Deletion	Chr3	2344420	2344423	4
Deletion	Chr8	2538406	2538406	1
Deletion	Chr3	2659800	2659808	9
Deletion	Chr10	4288167	4288167	1
Deletion	Chr4	4549709	4549714	6
Deletion	Chr10	4567032	4567032	1
Deletion	Chr5	4980543	4980553	11	LOC_Os05g08990
Deletion	Chr3	6289392	6289401	10
Deletion	Chr2	7295587	7295587	1
Deletion	Chr5	10667149	10667151	3
Deletion	Chr9	11287785	11287785	1
Deletion	Chr10	12776535	12776548	14
Deletion	Chr12	13484001	13484001	1
Deletion	Chr2	13495450	13495452	3
Deletion	Chr12	14023677	14023682	6
Deletion	Chr11	15411562	15411562	1
Deletion	Chr10	15883013	15883018	6
Deletion	Chr3	26725857	26725857	1	2
Deletion	Chr2	30376246	30376253	8
Deletion	Chr3	32280180	32280181	2

Insertions: 18

Variant Type	Chromosome	Start	End	Size (bp)
Insertion	Chr1	30699386	30699386	1
Insertion	Chr2	8674295	8674300	6
Insertion	Chr3	6504566	6504568	3
Insertion	Chr5	24933985	24933992	8
Insertion	Chr6	20528802	20528884	83
Insertion	Chr7	5897018	5897021	4
Insertion	Chr8	26029210	26029210	1
Insertion	Chr8	26639271	26639346	76
Insertion	Chr9	769213	769215	3
Insertion	Chr12	6676423	6676466	44
Insertion	Chr1	12883923	12883924	2
Insertion	Chr3	9464474	9464474	1
Insertion	Chr5	16053100	16053100	1
Insertion	Chr6	3255931	3255932	2
Insertion	Chr6	26618467	26618467	1
Insertion	Chr7	18807875	18807875	1
Insertion	Chr10	1871773	1871773	1
Insertion	Chr11	18792169	18792169	1

Inversions: 1

Variant Type	Chromosome	Position 1	Position 2	Number of Genes
Inversion	Chr10	8926496	9441524

No Translocation

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